| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4852498 | 15 (0.680) | 5 (0.340) | 4/174 | NT | 35.5% | intergenic (‑124/+173) | recR/ybaB | recombination protein RecR/nucleoid‑associated broad specificity regulator |
| ? | NC_002947 | = 4852557 | 8 (0.540) | intergenic (‑183/+114) | recR/ybaB | recombination protein RecR/nucleoid‑associated broad specificity regulator | |||||
GCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4852323‑4852498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtctgcttttttgtgggagcggccttgtgtcgcgaaagggGCGCGAAGCGGCCCCGGGATTTCAGCTTCGCAGCACAGAGTGCCGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCTTGCAGGCTTTGGGCGAGGTGATTTGACGCCACCGCCCCCGCTGGGTAT < NC_002947/4852557‑4852409 GCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGT < 1:466878/150‑1 CAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTGTATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTG < 1:458908/150‑1 AAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGG < 1:296279/150‑1 AAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGG < 1:342658/150‑1 GTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGCGCGGTCTTGCGTCGCGAAAG > 2:437907/1‑150 GAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCGGGATTTCAGCTT > 2:310018/1‑150 GCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCGGGATTTCAGCTTCGCAGCACAGAGTGCCGGGGCTGCTTCGCAGCCCTTTCG < 1:310018/150‑1 GCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCGGGATTTCAGCTTCGCAGCACAGAGTGCCGGGGCTGCTTCGCAGCCCTTTCG < 1:437907/150‑1 GTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCGGGATTTCAGCTTCGCAGCACAGAGTGCCGGGGCTGCTTCGCAGCCCTTTC > 1:257910/1‑140 GTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCGGGATTTCAGCTTCGCAGCACAGAGTGCCGGGGCTGCTTCGCAGCCCTTTC < 2:257910/140‑1 TCGCGAAAGGGGCGCGAAGCGGCCCCGGGATTTCAGCTTCGCAGCACAGAGTGCCGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCTTGCAGGCTTTGGGCGAGGTGATTTGACGCCACCGCCCC > 1:265452/1‑150 TCGCGAAAGGGGCGCGAAGCGGCCCCGGGATTTCAGCTTCGCAGCACAGAGTGCCGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCTTGCAGGCTTTGGGCGAGGTGATTTGACGCCACCGCCCC > 2:454091/1‑150 AAAGGGGCGCGAAGCGGCCCCGGGATTTCAGCTTCGCAGCACAGAGTGCCGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCTTGCAGGCTTTGGGCGAGGTGATTTGACGCCACCGCCCCCGCTG > 2:458964/1‑150 GGGCGCGAAGCGGCCCCGGGATTTCAGCTTCGCAGCACAGAGTGCCGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCTTGCAGGCTTTGGGCGAGGTGATTTGACGCCACCGCCCCCGCTGGGTA > 2:99473/1‑150 GGCGCGAAGCGGCCCCGGGATTTCAGCTTCGCAGAACAGAGTGCCGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCTTGCAGGCTTTGGGCGAGGTGATTTGACGCCACCGCCCCCGCTGGGTAT > 1:496797/1‑150 GCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4852323‑4852498‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtctgcttttttgtgggagcggccttgtgtcgcgaaagggGCGCGAAGCGGCCCCGGGATTTCAGCTTCGCAGCACAGAGTGCCGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCTTGCAGGCTTTGGGCGAGGTGATTTGACGCCACCGCCCCCGCTGGGTAT < NC_002947/4852557‑4852409 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |