New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1862281 =	15 (0.680)	3 (0.140)	3/248	NT	16.9%	intergenic (‑245/‑76)	purM/PP_1666	phosphoribosylformylglycinamidine cyclo‑ligase/hypothetical protein
	?	NC_002947	1862302 =	15 (0.700)					intergenic (‑266/‑55)	purM/PP_1666	phosphoribosylformylglycinamidine cyclo‑ligase/hypothetical protein

AAGGCGCGCGATTTTATCAGGGTTGCCGGGCAGCGGCCATCCTCAGGCCGACGGGCAGGGCGGTAATTGTTGAAAAAAGCTGGAGGGTGGTTGATGTGGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGTTTGTTCAATATTCTGGCAGCCGGTTGCCTGGCCCTGATCTCGGCCACTGCCCTG  >  NC_002947/1862134‑1862416                                                                                                                                                    |                                                                                                                                         aaGGCGCGCGATTTTATCAGGGTTGCCGGGCAGCGGCCATCCTCAGGCCGACGGGCAGGGCGGTAATTGTTGAAAAAAGCTGGAGGGTGGTTGATGTGGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCa                                                                                                                                        <  1:330172/150‑1 (MQ=255)                                           tCAGGCCGACGGGCAGGGCGGTAATTGTTGAAAAAAGCTGGAGGGTGGTTGATGTGGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTAc                                                                                             >  1:268863/1‑150 (MQ=255)                                           tCAGGCCGACGGGCAGGGCGGTAATTGTTGAAAAAAGCTGGAGGGTGGTTGATGTGGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTAc                                                                                             >  2:285161/1‑150 (MQ=255)                                                      ggCAGGGCGGTAATTGTTGAAAAAAGCTGGAGGGTGGTTGATGTGGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCt                                                                                  >  2:415703/1‑150 (MQ=255)                                                                 aaTTGTTGAAAAAAGCTGGAGGGTGGTTGATGTGGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAg                                                                       <  1:285161/150‑1 (MQ=255)                                                                        gAAAAAAGCTGGAGGGTGGTTGATGTGGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAAtcct                                                                >  2:47597/1‑150 (MQ=255)                                                                           aaaaGCTGGAGGGTGGTTGATGTGGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTa                                                                                              <  1:206876/117‑1 (MQ=255)                                                                           aaaaGCTGGAGGGTGGTTGATGTGGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTa                                                                                              >  2:206876/1‑117 (MQ=255)                                                                                 tGGAGGGTGGTTGATGTGGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGtt                                                       <  2:297045/150‑1 (MQ=255)                                                                                               tgtgGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGTTTGTTCAATATTCTg                                         <  1:92142/150‑1 (MQ=255)                                                                                                           tgtATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGTTTGTTCAATATTCTGGCAGCCGGTTGc                             <  1:449827/150‑1 (MQ=255)                                                                                                            gtATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGTTTGTTCAATATTCTGGCAGCCGGTTGcc                            <  2:67924/150‑1 (MQ=255)                                                                                                                       aagcaaCGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGTTTGTTCAATATTCTGGCAGCCGGTTGCCTGGcc                       >  2:221356/1‑144 (MQ=255)                                                                                                                       aagcaaCGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGTTTGTTCAATATTCTGGCAGCCGGTTGCCTGGcc                       <  1:221356/144‑1 (MQ=255)                                                                                                                           aaCGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGAAAGGAATCCTCAATGCGTTTGTTAAATATTCTGGCAGCCGGTTTCCTGGCCCCGATCTCgg             >  2:168493/1‑150 (MQ=255)                                                                                                                                   tcaagctgcaagaaaaaGCAGGCCGAGCGC‑CGGGCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGTTTGTTCAATATTCTGGCAGCCGGTTGCCTGGCCCTGATCTCGGCCACTGcc     <  2:350497‑M1/133‑1 (MQ=255)                                                                                                                                      cGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGTTTGTTCAATATTCTGGCAGCCGGTTGCCTGGCCCTGATCTCGGCCACTGCCCTg  <  2:389481/150‑1 (MQ=255)                                                                                                                                              gaaaaaGCAGGCCGAGCGC‑CGGGCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGttt                                                      <  2:218625‑M1/84‑1 (MQ=255)                                                                                                                                              gaaaaaGCAGGCCGAGCGC‑CGGGCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGttt                                                      >  1:218625‑M1/7‑90 (MQ=255)                                                                                                                                                    |                                                                                                                                         AAGGCGCGCGATTTTATCAGGGTTGCCGGGCAGCGGCCATCCTCAGGCCGACGGGCAGGGCGGTAATTGTTGAAAAAAGCTGGAGGGTGGTTGATGTGGTTGCATGTGTATAAGCTGCAAGCAACGAGCTTCACGCTGCACGACAATGCAGCCCG‑GCGCTCGGCCTGCTTTTTCTTGCAGCTTGAAGCTTACGGCTTGAAGCTCGACTGGACAGGAATCCTCCATGCGTTTGTTCAATATTCTGGCAGCCGGTTGCCTGGCCCTGATCTCGGCCACTGCCCTG  >  NC_002947/1862134‑1862416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.