| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 31361 = | 43 (1.090) | 12 (0.330) | 8/244 | 3.3 | 24.1% | intergenic (+25/‑43) | PP_0026/PP_0027 | cobalt/cadmium/zinc exporter/membrane protein |
| ? | NC_002947 | 31389 = | 36 (1.000) | intergenic (+53/‑15) | PP_0026/PP_0027 | cobalt/cadmium/zinc exporter/membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCTCAGCCAGGAGGGTGATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/31517‑31361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagggtgatgtTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTA > NC_002947/31389‑31516 GTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCGGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCTCAGCCAGGAGG < 2:182838/150‑1 TTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCTCAGCCAGGAGGGTGA > 2:970622/1‑150 AACATCACCCTCAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGG < 1:571481/127‑1 AACATCACCCTCAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGG > 2:571481/1‑127 AACATCACCCTCAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGT < 1:705585/88‑1 AACATCACCCTCAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGT > 2:705585/1‑88 AACATCACCCTCAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCA > 1:341954/1‑66 AACATCACCCTCAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCA < 2:341954/66‑1 CATCACCCTCAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAAT < 1:434992/90‑1 CATCACCCTCAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAAT > 2:434992/1‑90 TCACCCTCAGCCAGGCTTGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAA > 1:526998/1‑150 TCACCCTCAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGT < 1:371152/84‑1 TCACCCTCAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGT > 2:371152/1‑84 CCCTCAGCCAGGAGGGTGATGTTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTACAGGGCGCTCTTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTA < 2:526998/150‑1 GTACTTCGTGATGATCCAGGCCATCGCTGAGCCTTCTGGAGGTTGTTGACGAGGGCAGGCGAAGCCATTCACCAACCCCCTTGAAGCGCTCCTGCCGTTTACGGCATCCCTCACCGCATTTTTTTTGCAACATCACCCTCAGCCAGGAGGGTGATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/31517‑31361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagggtgatgtTGCAAAAAAAATGCGGTGAGGGATGCCGTAAACGGCAGGAGCGCTTCAAGGGGGTTGGTGAATGGCTTCGCCTGCCCTCGTCAACAACCTCCAGAAGGCTCAGCGATGGCCTGGATCATCACGAAGTA > NC_002947/31389‑31516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |