| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 199912 | 0 (0.000) | 39 (1.000) | 32/264 | 0.4 | 100% | coding (5418/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 203095 = | NA (NA) | coding (8601/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
TTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/199763‑199912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGG > NC_002947/203095‑203243 TTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAG > 1:594122/1‑150TTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATAGACGCGGTCAGCGGCGCAGATGCGTGGAAG > 1:643642/1‑150 GACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGG > 2:182957/1‑150 GACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGG < 1:409801/150‑1 GACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGG < 1:141792/150‑1 GACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGG < 1:801399/150‑1 GACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCAGCGACTGCAACCGCACCAGACAACGTCGATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGG < 2:359407/150‑1 CGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTA > 2:664189/1‑150 ACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCAC > 2:728627/1‑150 CACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTG > 1:375058/1‑150 GTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCAC < 2:375058/150‑1 TGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCG < 2:21599/150‑1 CAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGAC > 1:869331/1‑150 CCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAAC < 2:651086/150‑1 ACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTC < 2:710604/150‑1 GCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGACCCCGACAAAGTCTAC < 2:750235/150‑1 CCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGGTTCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTC > 1:9904/1‑150 ACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGG < 1:451658/150‑1 CTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCA > 2:185998/1‑150 GCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGT < 2:661938/150‑1 GCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGT < 2:661016/150‑1 ACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGA < 1:490433/141‑1 ACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGA > 2:490433/1‑141 ACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGG > 1:966134/1‑93 ACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGG < 2:966134/93‑1 ACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAAT < 1:722791/150‑1 CCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATC < 1:451322/150‑1 GACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGAT < 1:255822/150‑1 ACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGTCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATC < 2:175921/150‑1 CGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAG < 1:728627/150‑1 CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGG < 2:869331/150‑1 CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGT < 2:16376/94‑1 CAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGT > 1:16376/1‑94 CCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGAT > 1:242419/1‑114 CCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGCTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGAT < 2:242419/114‑1 CGGTCAGCGGCGCAGATGCGTGGAAGCACCGTGGGTACTGCCACTGCCAATCTCGCATACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTG < 2:762158/150‑1 CAGATGCGTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCG < 1:182957/150‑1 GTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATC < 2:184292/79‑1 GTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATC > 1:184292/1‑79 GTGGAAGCACCGTGGGTACTGCCACTGTCACTGCCACGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCA > 1:80525/1‑150 TGGAAGCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCAC > 1:535709/1‑150 GCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGG > 2:690481/1‑150 TTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/199763‑199912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCACCGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGG > NC_002947/203095‑203243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |