| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 353061 = | 49 (1.240) | 9 (0.290) | 8/208 | 2.7 | 21.1% | intergenic (+25/+93) | hisF/cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein |
| ? | NC_002947 | 353133 = | 29 (0.940) | intergenic (+97/+21) | hisF/cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein | |||||
GCTGCAGGATAACGACAGGGTGGTGGGGATACTCGGGGATACCGAGCTTTACCACGCGCTGCTCGGCAAGAACCACGGTTGAAGCAATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/353235‑353061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcgtgcccgcgaagggcCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAACGAATCTGCAGTGCCTCACGCA > NC_002947/353133‑353281 GCTGCAGGATAACGACAGGGTGGTGGGGATACTCGGGGATACCGAGCTTTACCACGCGCTGCTCGGCAAGAACCACGGTTGAAGCAATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGT < 1:262351/150‑1 GGATAACGACAGGGTGGTGGGGATACTCGGGGATACCGAGCTTTACCACGCGCTGCTCGGCAAGAACCACGGTTGAAGCAATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACTCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGC < 1:793780/150‑1 GGATAACGACAGGGTGGTGGGGATACTCGGGGATAATGCTCGTTACCACGCGCTGCTCGGCAAGAACCACGGTTGAAGCAATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGC < 1:544070/150‑1 GATAACGACAGGGTGGTGGGGATACTCGGGGATACCGAGCTTTACCACGCGCTGCTCGGCAAGAACCACGGTTGAAGCAATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCG > 2:226550/1‑150 ATAACGACAGGGTGGTGGGGATACTCGGGGATACCGAGCTTTACCACGCGCTGCTCGGCAAGAACCACGGTTGAAGCAATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGG < 1:226550/150‑1 GACAGGGTGGTGGGGATACTCGGGGATACCGAGCTTTACCACGCGCTGCTCGGCAAGAACCACGGTTGAAGCAATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTG > 1:140787/1‑150 CAGGGTGGTGGGGATACTCGGGGATACCGAGCTTTACCACGCGCTGCTCGGCAAGAACCACGGTTGAAGCAATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCC > 2:418922/1‑150 GGGATACCGAGCTTTACCACGCGCTGCTCGGCAAGAACCACGGTTGAAGCAATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGT < 2:565938/127‑1 GGGATACCGAGCTTTACCACGCGCTGCTCGGCAAGAACCACGGTTGAAGCAATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGT > 1:565938/1‑127 AATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTC > 2:22509/1‑150 ATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCG < 1:22509/150‑1 GCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGA > 2:899171/1‑128 GCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGA < 1:899171/128‑1 CCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTAT > 1:699927/1‑150 CCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTG < 1:833742/106‑1 CCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTG > 2:833742/1‑106 TCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTG > 2:575392/1‑150 CCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCA > 2:533156/1‑150 CTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCCACCGGTGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTT < 2:624801/150‑1 CTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTT < 2:86271/150‑1 TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGTGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGG < 2:329343/147‑1 TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTT < 1:357163/150‑1 TGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGG > 1:329343/1‑147 GGGAGCGGGCGTGCCCGCGAATGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGAT < 1:158531/150‑1 GGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTAGCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATA < 1:435905/150‑1 GAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAA < 1:875349/150‑1 GCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAATTGCTTCAACCGTGTTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCT < 2:523779/127‑1 GCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCT > 1:523779/1‑127 GCGAAGGGCCGAGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAACGAATCTGCAGTGC > 1:205973/1‑150 CCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAACGAATCTGCAGTGCCTCACGCA > 2:281570/1‑150 GCTGCAGGATAACGACAGGGTGGTGGGGATACTCGGGGATACCGAGCTTTACCACGCGCTGCTCGGCAAGAACCACGGTTGAAGCAATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/353235‑353061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcgtgcccgcgaagggcCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCCCCACCACCCTGTCGTTATCCTGCAGCACCAGCTTGTTGCCGGTTTGATAACGAATCTGCAGTGCCTCACGCA > NC_002947/353133‑353281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |