| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1296905 | NA (NA) | 10 (0.270) | 10/252 | 2.8 | NA | coding (87/1329 nt) | PP_1133 | transposase |
| ? | NC_002947 | = 1296920 | NA (NA) | coding (102/1329 nt) | PP_1133 | transposase | |||||
CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1296750‑1296905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcgtgCCGG‑G‑GATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGCGAA < NC_002947/1296920‑1296772 CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTCACGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCAT > 1:553048/1‑150CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCAT > 2:521761/1‑150CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCAT < 1:781712/150‑1CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCAT > 2:777921/1‑150CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCAT > 2:788400/1‑150 ACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCAAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATT > 1:232238/1‑150 GTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTC > 1:902971/1‑150 ATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGT < 2:478539/150‑1 TGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAATCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG > 2:48927/1‑150 TGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG < 2:847591/150‑1 TGAGAGAGTGAACCCTTTAGCCACCGTCTGCCCAGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCTTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG < 2:407608/150‑1 TGAGAGACTTAACCCTTTCACCACCGTGCGCCCCGCGGGCCCTTTATCCTGCGAGGATTGATCATCGCGCGCAAGCCTTCCACGCCACGGTTTCCCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG < 2:205623/150‑1 CCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGG‑G‑GATCGACC > 1:663463/1‑150 GCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCG < 1:648912/119‑1 GCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCG > 2:648912/1‑119 GATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGG‑G‑GATCG < 1:366046/105‑1 GATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGG‑G‑GATCG > 2:366046/1‑105 ATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGG‑G‑GATCGACCGCCACGAAA < 1:653377/112‑1 ATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGG‑G‑GATCGACCGCCACGAAA > 2:653377/1‑112 CAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGG‑G‑GATCGACCGCCACGAAATGCT < 1:452637/96‑1 CAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGCCGG‑G‑GATCGACCGCCACGAAATGCT > 2:452637/1‑96 TCGATGTCGGTGGTCGAGAGCATTTCGTGGCGG‑TCGATC‑CCCGGCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGT > 2:976886/1‑108 TCGATGTCGGTGGTCGAGAGCATTTCGTGGCGG‑TCGATC‑CCCGGCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGT < 1:976886/108‑1 ATGTCGGTGGTCGAGAGCATTTCGTGACGGTC‑GATC‑CCCGGCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGATTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAG > 1:48927/1‑150 TTTCGTGCCGG‑G‑GATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGT > 1:600741/1‑150 TTCGTGCCGG‑G‑GATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTG < 1:589015/150‑1 TCGTGCCGG‑G‑GATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGG < 2:515080/150‑1 CGTGCCGG‑G‑GATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGC < 1:351362/150‑1 TGCCGG‑G‑GATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGG > 1:742974/1‑136 TGCCGG‑G‑GATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGG < 2:742974/136‑1 GCCGG‑G‑GATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGCGAA > 2:532080/1‑150 CACGTATGAGAGAGTGAACCCTTTCGCCACCGTGTGCCCCGCGCGCCCTTTATCCTGCGAGGATTCATCATGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1296750‑1296905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcgtgCCGG‑G‑GATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCGGGGCACACGGTGGCGAA < NC_002947/1296920‑1296772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |