New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5765441	39 (0.990)	8 (0.210)	8/252	3.4	17.8%	coding (41/768 nt)	PP_5059	hypothetical protein
	?	NC_002947	= 5765457	37 (0.990)					coding (57/768 nt)	PP_5059	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACT  >  NC_002947/5765294‑5765590                                                                                                                                                    |                                                                                                                                                      ggCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGaa                                                                                                                                                     >  2:843668/1‑150 (MQ=255)         caAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCaa                                                                                                                                             >  1:214300/1‑150 (MQ=255)                     aCGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGcc                                                                                                                                 >  1:447618/1‑150 (MQ=255)                           gCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAg                                                                                                                           >  1:823827/1‑150 (MQ=255)                               gATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCt                                                                                                                       <  1:767177/150‑1 (MQ=255)                                     gacTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGa                                                                                                                 >  1:44840/1‑150 (MQ=255)                                                   ccAGGCACTGAGCCTGCTCAAGGTCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATcgc                                                                                                                                                 <  1:554120/104‑1 (MQ=255)                                                   ccAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATcgc                                                                                                                                                 >  2:554120/1‑104 (MQ=255)                                                     aGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATcgacga                                                                                                 <  2:517308/150‑1 (MQ=255)                                                               ccTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGccag                                                                                       <  1:344395/150‑1 (MQ=255)                                                                    tCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGccagagccc                                                                                  >  1:200911/1‑150 (MQ=255)                                                                            cTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGcgcg                                                                          >  1:622991/1‑150 (MQ=255)                                                                             tGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGa                                                                         >  1:691357/1‑150 (MQ=255)                                                                               aaCATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACa                                                                       <  2:691357/150‑1 (MQ=255)                                                                                  aTCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGcc                                                                    >  2:76276/1‑150 (MQ=255)                                                                                     aCCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTa                                                                 >  1:249083/1‑150 (MQ=255)                                                                                     aCCAAGGGCGACTGAGACACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTa                                                                 >  1:721053/1‑150 (MQ=255)                                                                                                cTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGAAGGCCGGAATCGCGCAAGCGGCACCGGTCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGACGTACCCTGGCcctg                                                      >  2:484296/1‑150 (MQ=255)                                                                                                 tGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGCCAGCCGTACCCTGGCcctgc                                                     >  1:618615/1‑150 (MQ=255)                                                                                                        cccTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGcc                                              >  1:177400/1‑150 (MQ=255)                                                                                                         ccTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCg                                             <  2:823827/150‑1 (MQ=255)                                                                                                         ccTATGCGTTATCTGCTGTGTCTGTCGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCCACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCg                                             >  2:173927/1‑150 (MQ=255)                                                                                                           cttGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGACCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGt                                           <  1:233969/148‑1 (MQ=255)                                                                                                              gCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAACCCGGCAGCCGTACCCTGGCCCTGCCTGGGCCGGTGag                                        >  2:233969/1‑149 (MQ=255)                                                                                                                  tATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATg                                    <  2:240088/150‑1 (MQ=255)                                                                                                                     ctgctgTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCg                                 >  2:353482/1‑150 (MQ=255)                                                                                                                      tgctgTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGa                                <  2:51825/150‑1 (MQ=255)                                                                                                                       gctgTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGAt                               <  1:76276/150‑1 (MQ=255)                                                                                                                              cTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGccc                        >  2:464781/1‑150 (MQ=255)                                                                                                                              cTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGccc                        >  1:717926/1‑150 (MQ=255)                                                                                                                                 ttgttTTGCCTGATGGCCGGAATCGCGCAAGCGACACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGac                     >  2:48453/1‑150 (MQ=255)                                                                                                                                     tttGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCATGCCTGGGCCGGTGACCATGGCGATCATGCCCGACAccc                 <  2:214300/150‑1 (MQ=255)                                                                                                                                      ttGCCTGATGGCCGGAATCGCGCAAGCGCCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGCGCCCAGAGCCCGTCAACCGCGCCCGGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACAcccc                <  1:855445/150‑1 (MQ=255)                                                                                                                                        gCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCGTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGc              >  2:711738/1‑150 (MQ=255)                                                                                                                                         ccTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCa             >  2:585821/1‑150 (MQ=255)                                                                                                                                                 ccGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCg     >  2:920517/1‑150 (MQ=255)                                                                                                                                                 ccGGAATCGCGCAAGCGGAAGCGGCCAAAAAGGCCTACATGAGCATCATCATCGACGACCTGGGCGAGAGCCAAGAGGGCGACAGCCGTACACTGGCCCTGACTGGGCCGGTGACCATGGCGATCATGCACGACACCACGCATGACACCg     >  2:880634/1‑150 (MQ=255)                                                                                                                                                  cGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGa    >  1:123167/1‑150 (MQ=255)                                                                                                                                                    gAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACt  >  2:234854/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGAATCGCGCAAGCGGCACCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACT  >  NC_002947/5765294‑5765590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.