| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 199913 | 203346–202872 | 2960–3434 | 42 [0] | [10] 11 | PP_0168 | putative surface adhesion protein |
TTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACCGT > NC_002947/199763‑200061 | ttCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAG > 1:594122‑M1/1‑150 (MQ=255)ttCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATAGACGCGGTCAGCGGCGCAGATGCGTGGAAG > 1:643642‑M1/1‑150 (MQ=255) gACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgg > 2:182957‑M1/1‑142 (MQ=255) gACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgg < 1:409801‑M1/150‑9 (MQ=255) gACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgg < 1:141792‑M1/150‑9 (MQ=255) gACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgg < 1:801399‑M1/150‑9 (MQ=255) gACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCAGCGACTGCAACCGCACCAGACAACGTCGATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgg < 2:359407‑M1/150‑9 (MQ=255) cGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggta > 2:664189‑M1/1‑139 (MQ=255) accacTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccac > 2:728627‑M1/1‑132 (MQ=255) cacTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactg > 1:375058‑M1/1‑130 (MQ=255) gtcgtcGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcac < 2:375058‑M1/150‑25 (MQ=255) tGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccg < 2:21599‑M1/150‑32 (MQ=255) cAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggac > 1:869331‑M1/1‑116 (MQ=255) ccAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaac < 2:651086‑M1/150‑38 (MQ=255) aCAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtc < 2:710604‑M1/150‑41 (MQ=255) gCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgaccccgacaaagtctac < 2:750235‑M1/150‑44 (MQ=255) ccacGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGGTTCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtc > 1:9904‑M1/1‑104 (MQ=255) acGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcgg < 1:451658‑M1/150‑49 (MQ=255) cTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcacca > 2:185998‑M1/1‑97 (MQ=255) gCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgt < 2:661938‑M1/150‑64 (MQ=255) gCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgt < 2:661016‑M1/150‑64 (MQ=255) aCCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacga < 1:490433‑M1/141‑58 (MQ=255) aCCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacga > 2:490433‑M1/1‑84 (MQ=255) aCCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtggg > 1:966134‑M1/1‑84 (MQ=255) aCCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtggg < 2:966134‑M1/93‑10 (MQ=255) aCCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgatcaaat < 1:722791‑M1/150‑72 (MQ=255) ccAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgatcaaatc < 1:451322‑M1/150‑73 (MQ=255) gACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgatcaaatcgat < 1:255822‑M1/150‑76 (MQ=255) aCAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgtcccggacaacgtctacgtcggcaccaacgaccctgtgatcaaatcgatc < 2:175921‑M1/150‑77 (MQ=255) cGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgatcaaatcgatcgcaaccgttgaag < 1:728627‑M1/150‑90 (MQ=255) cAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgatcaaatcgatcgcaaccgttgaaggtgcgg < 2:869331‑M1/150‑96 (MQ=255) cAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgt < 2:16376‑M1/94‑40 (MQ=255) cAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgt > 1:16376‑M1/1‑55 (MQ=255) ccGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgat > 1:242419‑M1/1‑48 (MQ=255) ccGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGcaccgtggctactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgat < 2:242419‑M1/114‑67 (MQ=255) cgGTCAGCGGCGCAGATGCGTGGAAGcaccgtgggtactgccactgccaatctcgcatacaacgtctacgtcggcaccaacgaccctgtgatcaaatcgatcgcaaccgttgaaggtgcggatgtcggcaagttcgagcaactgacgctg < 2:762158‑M1/150‑125 (MQ=255) cAGATGCGTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgatcaaatcgatcgcaaccgttgaaggtgcggatgtcggcaagttcgagcaactgacgctggacaagaccccg < 1:182957‑M1/150‑137 (MQ=255) gTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgatcaaatc < 2:184292‑M1/79‑73 (MQ=255) gTGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgatcaaatc > 1:184292‑M1/1‑7 (MQ=255) gTGGAAGcaccgtgggtactgccactgtcactgccacggacaacgtctacgtcggcaccaacgaccctgtgatcaaatcgatcgcaaccgttgaaggtgcggatgtcggcaagttcgagcaactgacgctggacaagaccccggtcagca > 1:80525‑M1/1‑7 (MQ=255) tGGAAGcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgatcaaatcgatcgcaaccgttgaaggtgcggatgtcggcaagttcgagcaactgacgctggacaagaccccggtcagcac > 1:535709‑M1/1‑6 (MQ=255) gcaccgtgggtactgccactgtcactgccccggacaacgtctacgtcggcaccaacgaccctgtgatcaaatcgatcgcaaccgttgaaggtgcggatgtcggcaagttcgagcaactgacgctggacaagaccccggtcagcacgtcgg > 2:690481‑M1/1‑1 (MQ=255) | TTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGCTCGGCGACTGCAACCGCACCAGACAACGTCTATGTCGGCACCAACGCGCCGGTGATCAATGCCATCGACGCGGTCAGCGGCGCAGATGCGTGGAAGTTTGAAAACCTGAACCTGGACAAGACCCCGGTCAGCACCGAGGTCACCGACGAGCCAGGCACTCCAGGCAACGAAGGCGACATCGTCAAGGTCACCATCACGGCCGACCAGACTTCGGTGGCCGAGAACGTCAAACCGACCTTCACCGT > NC_002947/199763‑200061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |