| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5882742 = | 53 (1.270) | 14 (0.370) | 10/238 | 2.8 | 25.5% | intergenic (+17/+31) | serA/PP_5156 | bifunctional D‑3‑phosphoglycerate dehydrogenase/alpha‑ketoglutarate reductase/hypothetical protein |
| ? | NC_002947 | 5882773 = | 34 (0.900) | coding (477/477 nt) | PP_5156 | hypothetical protein | |||||
AGACCGAAACCAGCATTACCCTGACCCCGGGCAAGCACACCCTGCAACTGATTCTGGGTGACCAGTATCATGTGCCATTCAAGCCTAGCGTCGAGTCGAAGAAGATCACGGTTGAAGTGAAATAAAAAAAGGGAGGCCACCAG‑GGCCTCCCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5882897‑5882742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctccctttttTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCTTGCCGAAGTGCAG > NC_002947/5882773‑5882916 AGACCGAAACCAGCATTACCCTGACCCCGGGCAAGCACACCCTGCAACTGATTCTGGGTGACCAGTATCATGTGCCATTCAAGCCTAGCGTCGAGTCGAAGAAGATCACGGTTGAAGTGAAATAAAAAAAGGGAGGCCACCAG‑GGCCTCC > 1:352155/1‑150 AAACCAGCATTACCCTGACCCCGGGCAAGCACACCCTGCAACTGATTCTGGGTGACCAGTATCATGTGCCATTCAAGCCTAGCGTCGAGTCGAAGAAGATCACGGTTGAAGTGAAATAAAAAAAGGGAGGCCACCAG‑GGCCTCCCTTTTT < 1:396817/150‑1 CCCCGGGCAAGCACACCCTGCAACTGATTCTGGGTGACCAGTATCATGTGCCATTCAAGCCTAGCGTCGAGTAGAAGAAGATCAAGGTTGAAGTGAAAAAAAAAAAGGAAGGCCCTGGT‑GGCCTCCCTTTTTTTATTTCACTTCAACCtt > 2:1008834/1‑148 CCCGGGCAAGCACACCCTGCAACTGATTCTGGGTGACCAGTATCATGTGCCATTCAAGCCTAGCGTCGAGTCGAAGAAGATCACGGTTGAAGTGAAATAAAAAAAGGGAGGCCACCAG‑GGCCT > 1:179648/1‑123 CCCGGGCAAGCACACCCTGCAACTGATTCTGGGTGACCAGTATCATGTGCCATTCAAGCCTAGCGTCGAGTCGAAGAAGATCACGGTTGAAGTGAAATAAAAAAAGGGAGGCCACCAG‑GGCCT < 2:179648/123‑1 ACACCCTTCAACTGATTCTGGGTGACCATTATCATGTGCCATTCAAGCCTAGCCTCGAGTCGAAGAAGATCACGGTTGAAGTGAAATAAAAAAAGGGAGGCC‑CTGGTGGGCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGA < 1:1008834/150‑1 CTGCAACTGATTCTGGGTGACCAGTATCATGTGCCATTCAAGCCTAGCGTCGAGTCGAAGAAGATCACGGTTGAAGTGAAATAAAAAAAGGGAGGCCACCAG‑GGCCTCCCTTT < 2:334290/113‑1 CTGCAACTGATTCTGGGTGACCAGTATCATGTGCCATTCAAGCCTAGCGTCGAGTCGAAGAAGATCACGGTTGAAGTGAAATAAAAAAAGGGAGGCCACCAG‑GGCCTCCCTTT > 1:334290/1‑113 CAGTATCATGTGCCATTCAAGCCTAGCGTCGAGTCGAAGAAGATCACGGTTGAAGTGAAATAAAAAAAGGGAGGCC‑CTGGTGGCCTCCCTTTTTTTA > 1:976538/1‑97 CAGTATCATGTGCCATTCAAGCCTAGCGTCGAGTCGAAGAAGATCACGGTTGAAGTGAAATAAAAAAAGGGAGGCC‑CTGGTGGCCTCCCTTTTTTTA < 2:976538/97‑1 AAAGGGAGGCCACCAG‑GGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCG > 1:594571/1‑150 AAAGGGAGGCCACCAG‑GGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCG > 2:948199/1‑150 AAAGGGAGGCCACCAG‑GGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCG < 2:594571/150‑1 AAAGGGAGGCCACCAG‑GGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCG < 1:948199/150‑1 AAAGGGAGGCCACCAG‑GGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCG > 2:257130/1‑150 GGGAGGCCACCAG‑GGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCG > 1:5096/1‑147 GGGAGGCCACCAG‑GGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCG < 2:5096/147‑1 GGAGGCCACCAG‑GGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCT > 1:150600/1‑150 GAGGCCACCAG‑GGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAAT < 2:636456/99‑1 GAGGCCACCAG‑GGCCTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAAT > 1:636456/1‑99 CTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCTTGCCGAAGT > 2:499833/1‑150 CTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGT > 1:811384/1‑97 CTCCCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGT < 2:811384/97‑1 CCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCTTGCCGAAGTGCA < 2:396817/150‑1 CCTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCTTGCCGAAGTGCA < 1:182511/150‑1 CTTTTTTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCTTGCCGAAGTGCAG > 2:1000242/1‑150 AGACCGAAACCAGCATTACCCTGACCCCGGGCAAGCACACCCTGCAACTGATTCTGGGTGACCAGTATCATGTGCCATTCAAGCCTAGCGTCGAGTCGAAGAAGATCACGGTTGAAGTGAAATAAAAAAAGGGAGGCCACCAG‑GGCCTCCCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5882897‑5882742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctccctttttTTATTTCACTTCAACCGTGATCTTCTTCGACTCGACGCTAGGCTTGAATGGCACATGATACTGGTCACCCAGAATCAGTTGCAGGGTGTGCTTGCCCGGGGTCAGGGTAATGCTGGTTTCGGTCTGTGCCTTGCCGAAGTGCAG > NC_002947/5882773‑5882916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |