New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 197078242 (1.000)12 (0.340) 10/224 2.6 23.6% intergenic (+33/‑233) mtnA/PP_mr25 methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
?NC_002947 = 1970844 42 (1.180)intergenic (+95/‑171) mtnA/PP_mr25 methylthioribose‑1‑phosphate isomerase/gyrA regulatory region

CCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCATT  >  NC_002947/1970698‑1970986
                                                                                                                                                  |                                                                                                                                              
cccGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGCACCTGTGGGGGCGGGCGagc                                                                                                                                             >  2:131273‑M2/1‑147 (MQ=255)
             aaGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggcc                                                                                                                                <  1:387864‑M2/150‑17 (MQ=255)
              aGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggccg                                                                                                                               >  1:667036‑M2/1‑133 (MQ=255)
                   ccTCAGCGCGTTTGCCGCACGCGCCCGCACTGATTTCGTATCGCCTCACCGGCCTCTCCGCGGGCTTGCCCCCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCa                                                                                                                          <  1:140144/149‑1 (MQ=38)
                       aGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCATTTCATCCGGTGTATACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCa                                                                                                                      >  2:556967/1‑150 (MQ=38)
                         cTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTTGCATATCGCATTGCCTTTGAGCCGTGGTGAACCTGTGCGGGCGGGCGAGCCCGCCAAGAGGCCGGTGCAGGccag                                                                                                                    >  2:165050/1‑147 (MQ=38)
                              ttGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACaaa                                                                                                               >  2:638026/1‑150 (MQ=255)
                                  cGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAAcc                                                                                                           >  1:573167/1‑150 (MQ=255)
                                       tcgcCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAAGCCGTTGCAGGCAATACAAAAACCAGGtt                                                                                                      <  1:295960/149‑1 (MQ=255)
                                         gcCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGAGGACGTACTAGCCCGCCAAGAGGCCGGTGCAGGCAATACAAAAACCAGGttta                                                                                                    >  2:295960/1‑149 (MQ=255)
                                           cTGCACTGATTTTGTATTGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAAt                                                                                                                    <  2:585521/132‑1 (MQ=255)
                                           cTGCACTGATTTTGTATTGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAAt                                                                                                                    >  1:585521/1‑132 (MQ=255)
                                                 tGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagc                                                                                                                                             >  1:203548‑M2/1‑98 (MQ=255)
                                                 tGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagc                                                                                                                                             <  2:203548‑M2/101‑4 (MQ=255)
                                                 tGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATATAAAAACCAGGTTTCAAGCGCgg                                                                                            >  2:66368/1‑150 (MQ=255)
                                                 tGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCgg                                                                                            >  1:156729/1‑150 (MQ=255)
                                                  gATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGc                                                                                           <  1:309661/150‑1 (MQ=255)
                                                   aTTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCt                                                                                          >  1:773612/1‑150 (MQ=255)
                                                     tttGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTga                                                                                        <  2:573167/150‑1 (MQ=255)
                                                     tttGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTga                                                                                        <  2:1046857/150‑1 (MQ=255)
                                                          aTCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgggaggaggcctttgaggcgttactagagcagcgcgggcgcttgcagaaaaccagc                                                                                   <  2:323473‑M2/150‑62 (MQ=255)
                                                           tCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCaa                                                                                  <  2:101654/150‑1 (MQ=255)
                                                           tCGCCTCACCGGCCTCTTCGCGCGCTTGCCCGATCCTACGGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGGGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCaa                                                                                  >  1:250434/1‑150 (MQ=255)
                                                              ccTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTg                                                                               >  2:660088/1‑150 (MQ=255)
                                                                tCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGcc                                                                             >  1:174362/1‑150 (MQ=255)
                                                                 cACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCa                                                                            <  2:156729/150‑1 (MQ=255)
                                                                      gCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAAGTCGCTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACctct                                                                       >  1:541107/1‑150 (MQ=255)
                                                                       ccTCTTCGCGGGCTTGCCCGCTCCCACTGGGATTTCGAACGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggccggtgaggcgatacaaaatcagtgcaggcgcttgcggaaaaccagctgagccagcttgg                                                                      >  1:323473‑M2/1‑76 (MQ=255)
                                                                         tctTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggccggtgaggcgatacaaaatcagtgcaggcgcttgcggcaaac                                                                                       >  1:742758‑M2/1‑74 (MQ=255)
                                                                         tctTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggccggtgaggcgatacaaaatcagtgcaggcgcttgcggcaaac                                                                                       <  2:742758‑M2/131‑58 (MQ=255)
                                                                         tctTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggccggtgaggcgatacaaaat                                                                                                              <  1:120698‑M2/108‑35 (MQ=255)
                                                                         tctTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggccggtgaggcgatacaaaat                                                                                                              >  2:120698‑M2/1‑74 (MQ=255)
                                                                          ctTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggccggtgaggcgatacaaaatcagtgcaggcgcttgcggcaaaccagctgagccagcttggcag                                                                   <  2:29735‑M2/150‑78 (MQ=255)
                                                                                gggCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCtctc                                                                      >  2:370267/1‑141 (MQ=255)
                                                                                gggCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCtctc                                                                      <  1:370267/141‑1 (MQ=255)
                                                                                  gCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggccggtgcaggcaatacaaaatcagtgcaggcgcttgcg                                                                                            >  2:99189‑M2/1‑65 (MQ=255)
                                                                                  gCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggccggtgcaggcaatacaaaatcagtgcaggcgcttgcg                                                                                            <  1:99189‑M2/117‑53 (MQ=255)
                                                                                   cTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGccccc                                                          <  2:387864/150‑1 (MQ=255)
                                                                                       cacGCTCCAACTGGGATAACGCATGGCCTGAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGt                                                      >  2:232684/3‑150 (MQ=255)
                                                                                           cTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAgc                                                                                                >  2:879030/1‑104 (MQ=255)
                                                                                           cTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAgc                                                                                                <  1:879030/104‑1 (MQ=255)
                                                                                            tCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggccggtgaggcgatacaaaatcagtgcaggcgcttgcggcaaaccagctgagccagcttggcagcatccgggcgctcgacga                                                 <  1:851439‑M2/150‑96 (MQ=255)
                                                                                            ccccTCTGGGCTATCGCATGCCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTtgtg                                                 <  1:165050/149‑1 (MQ=255)
                                                                                              ccACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGagcccgcgaagaggccggtgaggcgatacaaaatcagtgcaggcgcttgcggcaaaccagctgagccagcttggcagcatccgggcgctcgacgatg                                               >  1:29735‑M2/1‑53 (MQ=255)
                                                                                              ccACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGAt                                               >  1:129283/1‑150 (MQ=255)
                                                                                                 cTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAAc                                            >  2:816597/1‑150 (MQ=255)
                                                                                                    ggATATAGCACGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATc                                         <  2:651667/150‑1 (MQ=255)
                                                                                                             aTGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGttt                                >  1:757089/1‑150 (MQ=255)
                                                                                                               ggCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAgcgc                                                                                              >  1:964059/1‑86 (MQ=255)
                                                                                                               ggCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAgcgc                                                                                              <  2:964059/86‑1 (MQ=255)
                                                                                                                 ccTTAGGGCCGCGGTGAACCTGTTGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATATAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCaa                            <  1:66368/150‑1 (MQ=255)
                                                                                                                   ttAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGAATGTGATAACATCCGGCAGTTTCCAAGa                          <  1:556967/150‑1 (MQ=255)
                                                                                                                   ttACGGCGGTGGTTGAGCTGTGGGGGCTGGCTagcccgcgaagaggccggtgaggcgatacaaaatcagtgcaggcgcttgcggcaaaccagctgagccagcttggcagcatccgggcgctcgacgatgccgcgttcggtcacgatcaca                          >  2:851439‑M2/1‑32 (MQ=255)
                                                                                                                              gtgAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCAc               >  1:1034732/1‑150 (MQ=255)
                                                                                                                                gAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCAcgg             <  2:129283/150‑1 (MQ=255)
                                                                                                                                    cTGTGGTGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAGGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATaa                                             <  2:545272/114‑1 (MQ=255)
                                                                                                                                    cTGTGGTGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATaa                                             >  1:545272/1‑114 (MQ=255)
                                                                                                                                        gggggCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTc     <  2:174362/150‑1 (MQ=255)
                                                                                                                                           ggcgggcgAGCCCGCGAAGAGGCCGGTGCAGCACATCCCAAAACCAGGTTTCAAGCGCTGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCAtt  <  2:250434/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                              
CCCGGATGCTGCCAAGCTGGCTCAGCTGGTTTGCCGCAAGCGCCTGCACTGATTTTGTATCGCCTCACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACTGGGATATCGCATGGCCTTAGGGCCGTGGTGAACCTGTGGGGGCGGGCGAGCCCGCGAAGAGGCCGGTGCAGGCAATACAAAAACCAGGTTTCAAGCGCGGCTGAGACCAACTGCCACCTCTCCCCACCGCCCCCGCGTTTGTGATAACATCCGGCAGTTTCCAAGACCGCCCATCACGGCGGCCTTCATT  >  NC_002947/1970698‑1970986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.