| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5513315 | 30 (0.970) | 10 (0.400) | 9/218 | 1.6 | 29.8% | intergenic (+45/‑109) | urtD/urtE | ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein |
| ? | NC_002947 | = 5513371 | 23 (0.920) | intergenic (+101/‑53) | urtD/urtE | ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein | |||||
GACATGGGCTTCGTCGGCAGCATTGCCGACCATGTGACCGTGCTGCACCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5513142‑5513315‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtgccggcctcttcgcgggtaaACCCGCTCCTACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGGTTACCCGCGAAGAGGCCGGCACAGGCGCCAAAAATTCAAATCCGGTCAGCGGCCCAGATACACCTCGACCACCCGCTCATCTGCCTGCAC < NC_002947/5513371‑5513226 GACATGGGCTTCGTCGGCAGCATTGCCGACCATGTGACCGTGCTGCACCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGC < 2:203418/150‑1 TCGGCAGCATTGCCGACCATGTGACCGTGCTGCACCAGGGGAGTGTGCTGGCGGAGGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTC > 1:567170/1‑150 CGGCAGCATTGCCGACCATGTGACCGTGCTGCACCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGCGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCAGCCTCT < 2:86191/150‑1 ACCGTGCTGCACCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAC > 1:592920/1‑150 CAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGAACCGC < 2:592920/150‑1 GGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTG < 2:20704/86‑1 GGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTG > 1:20704/1‑86 GTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGGTTAC > 1:283561/1‑150 GTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGGTTAC < 2:283561/150‑1 AGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGG > 1:360006/1‑82 AGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGG < 2:360006/82‑1 GAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGG < 1:628740/122‑1 GAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGG > 2:628740/1‑122 AGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGG < 1:528462/121‑1 AGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGG > 2:528462/1‑121 GTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGAACC < 2:41695/85‑1 GTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGAACC > 1:41695/1‑85 cCCTGTGCCGGGCTCTGCGCGGGTAACCCCGCTCCTACGACGGGAACCGCTCCATGGCATTACGCCCACTGTAGGAACGGGGTTACCCGCGAAGTGGCCGGCACAGGCGCCAAAAATTCAAATCCGGTCAGCGGCCCAGATACCCCTCGA < 2:581831/149‑1 CCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGGTTACCCGCGAAGAGGCCGGCACAGGCGCCAAAAATTCAAATCCGGTCAGCGGCCCAGATACACCTCGAC > 1:186686/1‑150 TCGCGGGTAAACCCGCTCCTACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGGTTACCCGCGAAGAGGCCGGCACAGGCGCCAAAAATTCAAATCCGGTCAGCGGCCCAGATACACCTCGACCACCCGCTCATCTGC < 1:743195/150‑1 GGTAAACCCGCTCCAACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGGTTACCCGCGAAGAGGCCGGCACAGGCGCCAAAAATTCAAATCCGGTCAGCGGCCCAGATACACCTCGACCACCCGCTCATCTGCCTGCA < 2:585017/150‑1 GTAAACCCGCTCCTACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGGTTACCCGCGAAGAGGCCGGCACAGGCGCCAAAAATTCAAATCCGGTCAGCGGCCCAGATACACCTCGACCACCCGCTCATCTGCCTGCAC < 1:245222/150‑1 GACATGGGCTTCGTCGGCAGCATTGCCGACCATGTGACCGTGCTGCACCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5513142‑5513315‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtgccggcctcttcgcgggtaaACCCGCTCCTACGACGGGAACCGCCCCATGGCATTACGCCCACTGTAGGAACGGGGTTACCCGCGAAGAGGCCGGCACAGGCGCCAAAAATTCAAATCCGGTCAGCGGCCCAGATACACCTCGACCACCCGCTCATCTGCCTGCAC < NC_002947/5513371‑5513226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |