| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 277165 = | 56 (1.990) | 7 (0.280) | 6/216 | NT | 12.2% | coding (3/1221 nt) | PP_0223 | DszC family monooxygenase |
| ? | NC_002947 | 277234 = | 52 (2.100) | intergenic (‑67/+30) | PP_0223/PP_0224 | DszC family monooxygenase/DszC family monooxygenase | |||||
CACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/277323‑277165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgtgtcgcgatgGGCTGCAAAGCAGCCCCCA‑GGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCA > NC_002947/277234‑277374 CACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGT > 1:145127/1‑150CACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGT > 2:277432/1‑150 CCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTT < 1:718989/131‑1 CCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTT > 2:718989/1‑131 ACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCA‑GGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAA > 1:104839/1‑136 ACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCA‑GGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAA < 2:104839/136‑1 TCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAGGCAGCCCCCA‑GGGCCC > 1:345477/1‑79 TCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAGGCAGCCCCCA‑GGGCCC < 2:345477/79‑1 CTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCA‑GGGCCCGCAAATCAGATCCAGGAATGCTTGCCGTTCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCA > 2:583929/1‑150 CTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCA‑GGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGT < 1:674446/125‑1 CTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCA‑GGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGT > 2:674446/1‑125 AGCGGCCTTGTGTCGCGATGTGCCGCAAAGCGGCCCCAATGGCCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCG < 2:678624/150‑1 CCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCA‑GGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACC < 1:560321/121‑1 CCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCA‑GGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACC > 2:560321/1‑121 GTCGCGATGGGCTGCAAAGCAGCCCCCA‑GGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCA > 2:253982/1‑150 CACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/277323‑277165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgtgtcgcgatgGGCTGCAAAGCAGCCCCCA‑GGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCA > NC_002947/277234‑277374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |