| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4150068 = | 22 (0.780) | 4 (0.170) | 4/210 | NT | 18.3% | intergenic (+23/‑374) | PP_3654/PP_3655 | leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein |
| ? | NC_002947 | 4150135 = | 17 (0.710) | intergenic (+90/‑307) | PP_3654/PP_3655 | leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein | |||||
GCAGATGAAAGGTTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGGTTTACCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4150162‑4150068‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtttacccgcgaagAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTA > NC_002947/4150135‑4150281 GCAGATGAAAGGTTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGG > 1:126846/1‑82GCAGATGAAAGGTTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGG < 2:126846/82‑1 CCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAAC < 1:272906/91‑1 CCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAAC > 2:272906/1‑91 CGACGGGCTACGTCACCTTTGCAGGCGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCG < 1:717078/84‑1 CGACGGGCTACGTCACCTTTGCAGGCGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCG > 2:717078/1‑84 AAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAATGCCTTCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTA > 1:536614/1‑150 GCAGATGAAAGGTTGCCTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGGTTTACCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4150162‑4150068‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtttacccgcgaagAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCTTGCTACCGTCACCCGCTTA > NC_002947/4150135‑4150281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |