New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2076632 =29 (1.030)4 (0.150) 4/232 NT 12.8% coding (570/750 nt) PP_1852 enoyl‑ACP reductase
?NC_002947 2076675 = 27 (1.020)coding (527/750 nt) PP_1852 enoyl‑ACP reductase

GCCCCGGTGATATACCCGGCTTCAGGCCCTGCCAGGTAAGCCACGAAGCTGGCAATCTCCTCCGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGTGCACCACCGGCAAACGGCATGCGCTCGGCGTTG  >  NC_002947/2076486‑2076767
                                                                                                                                                  |                                                                                                                                       
gccgcggcacgctatatgggccagggcggtcgtatcatcaacattggcagcaccaacgccgagcgcatgccgtttgccggtggtgcaccgtacgccatgagcaagtcggcactggttggtctgacccgcggcatggcacgcgacctcggg                                                                                                                                      <  1:671737‑M1/4‑1 (MQ=255)
  cccGGTGATATACCCGGCTTCAGGCCCTGCCAGGTAAGCCACGAAGCTGGCAATCTCCTCCGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCAccgggcc                                                                                                                                    >  1:638036/1‑150 (MQ=255)
               ccGGCTTCAGGCCCTGCCAGGTAAGCCACGAAGCTGGCAATCTCCTCCGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACgttg                                                                                                                       >  1:238925/1‑150 (MQ=255)
                cGGCTTCAGGCCCTGCCAGGTAAGCCACGAAGCTGGCAATCTCCTCCGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACgttgt                                                                                                                      <  1:294177/150‑1 (MQ=255)
                             tGCCAGGTAAGCCACGAAGCTGGCAATCTCCTCCGGCTCGCCATATCGCCCAATGGCCATCAGCGGAGTCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGcc                                                                                                         >  2:132573/1‑150 (MQ=255)
                                cAGGTAAGCCACGAAGCTGGCAATCTCCTCCGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTg                                                                                                      <  1:371132/150‑1 (MQ=255)
                                 aGGTAAGCCACGAAGCTGGCAATCTCCTCCGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGc                                                                                                     >  2:582600/1‑150 (MQ=255)
                                   gTAAGCCACGAAGCTGGCAATCTCCTCCGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCgg                                                                                                   >  2:671737/1‑150 (MQ=255)
                                     tcaacattggcagcaccaacgccgagcgcatgccgtttgccggtggtgcaccgtacgccatgagcaagtcggcactggttggtctgacccgcggcatggcacgcgacctCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGcc                                                                                                 <  1:506078‑M1/41‑1 (MQ=255)
                                         cattggcagcaccaacgccgagcgcatgccgtttgccggtggtgcaccgtacgccatgagcaagtcggcactggttggtctgacccgcggcatggcacgcgacctCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAg                                                                                             >  2:506078‑M1/106‑150 (MQ=255)
                                         cACGAAGCTGGCAATCTCCTCCGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAg                                                                                             >  1:350711/1‑150 (MQ=255)
                                                   gCAATCTCCTCCGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGcc                                                                                   >  1:297000/1‑150 (MQ=255)
                                                          cctccGGCTCGCCATATCGCCCAATGGCCATCAGCGGAGTCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCcgc                                                                            <  1:132573/150‑1 (MQ=255)
                                                            tccGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTaa                                                                                                             >  2:733179/1‑115 (MQ=255)
                                                            tccGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTaa                                                                                                             <  1:733179/115‑1 (MQ=255)
                                                                           cGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGt                                                           <  1:672887/150‑1 (MQ=255)
                                                                                        tCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCACCCAGTGCCGACTTGCTcc                                              >  2:631556/1‑149 (MQ=255)
                                                                                          aGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATg                                            >  1:284018/1‑150 (MQ=255)
                                                                                                   aGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGt                                   >  1:120098/1‑150 (MQ=255)
                                                                                                     gCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGTGc                                 >  1:166673/1‑150 (MQ=255)
                                                                                                                 cTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGTGCACCACCGGCaaa                     <  2:641340/150‑1 (MQ=255)
                                                                                                                    gCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCcgc                                                                            <  1:322054/92‑1 (MQ=255)
                                                                                                                    gCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCcgc                                                                            >  2:322054/1‑92 (MQ=255)
                                                                                                                    gCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGTGCACCACCGGCAAACgg                  >  1:251337/1‑150 (MQ=255)
                                                                                                                       tctgacccgcggcatggcacgcgacctCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAgg                                                                                            >  1:638357‑M1/28‑73 (MQ=255)
                                                                                                                       tctgacccgcggcatggcacgcgacctCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAgg                                                                                            <  2:638357‑M1/46‑1 (MQ=255)
                                                                                                                       aCTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGGCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGTGCACCACCGGCAAACGGCAt               >  2:633480/1‑150 (MQ=255)
                                                                                                                            ccGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGTGCACCACCGGCAAACGGCa                <  2:269042/144‑1 (MQ=255)
                                                                                                                            ccGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGTGCACCACCGGCAAACGGCa                >  1:269042/1‑144 (MQ=255)
                                                                                                                                  tCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCTCGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGTGCACAACCGGCAAACGGCATGCGCTCGGCgg    >  2:432805/1‑149 (MQ=255)
                                                                                                                                  tCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGTGCACCACCGGCAAACGGCATGCGCTCGGCGt    >  2:432169/1‑150 (MQ=255)
                                                                                                                                    aTGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATg                                                                                <  2:390845/72‑1 (MQ=255)
                                                                                                                                    aTGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATg                                                                                >  1:390845/1‑72 (MQ=255)
                                                                                                                                    aTGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGTGCACCACCGGCAAACGGCATGCGCTCGGCGTTg  <  2:238925/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                       
GCCCCGGTGATATACCCGGCTTCAGGCCCTGCCAGGTAAGCCACGAAGCTGGCAATCTCCTCCGGCTCGCCATATCGCCCAATGGCCATCAGCGGAATCAGGCTCTCGGCAAACTCGCCACTGGCCGGGTTCATGTCGGTGTCCACCGGGCCGGGCTGCACGTTGTTCACGGTAATGCCCTGCGGCCCGAGGTCGCGTGCCATGCCGCGGGTCAGACCAACCAGTGCCGACTTGCTCATGGCGTACGGTGCACCACCGGCAAACGGCATGCGCTCGGCGTTG  >  NC_002947/2076486‑2076767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.