New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3978404	26 (0.920)	3 (0.110)	3/236	NT	9.2%	coding (2271/3762 nt)	cobN	aerobic cobaltochelatase subunit CobN
	?	NC_002947	= 3978429	34 (1.260)					coding (2246/3762 nt)	cobN	aerobic cobaltochelatase subunit CobN

GGTCGGGTAACTGTGCCGTGCCCTCCAATGCCTGCCCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTGGCCAAAGCCCGCAGCAGGCTGGCATTACCCCCACGACCGTCGCCACGCTCGACCCGCAACAACGCCAGCAG  >  NC_002947/3978286‑3978550                                                                                                                       |                                                                                                                                                   ggTCGGGTAACTGTGCCGTGCCCTCCAATGCCTGCCCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCcgtggcagggcatacgccctgaacagctgca                                                                                                                     <  2:275199‑M1/150‑32 (MQ=255)   tcaggTAACTGTGCCGTGCCCTCCAATGCCTGCCCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCa                                                                                                                   >  1:751480/4‑150 (MQ=255)   tcaggTAACTGTGCCGTGCCCTCCAATGCCTGCCCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCa                                                                                                                   >  1:751417/4‑150 (MQ=255)                       cTCCAATGCCTGCCCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCACGGTGGCAGACGAGCggggc                                                                                               >  2:418623/1‑148 (MQ=255)                               cctgccCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCg                                                                                                             <  1:472778/128‑1 (MQ=255)                               cctgccCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCg                                                                                                             >  2:472778/1‑128 (MQ=255)                               cctgccCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGGCGAGCGGGGCCCAGCCCg                                                                                       >  2:204504/1‑150 (MQ=255)                                ctgccCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCgg                                                                                      <  2:717018/150‑1 (MQ=255)                                  gccCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCGCAGCCCGGCa                                                                                    >  1:679193/1‑150 (MQ=255)                                      gATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAg                                                                                >  2:79136/1‑150 (MQ=255)                                           ccTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTc                                                                                                                                               <  1:163947/82‑1 (MQ=255)                                           ccTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTc                                                                                                                                               >  2:163947/1‑82 (MQ=255)                                            cTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCCGCTCTCAGTAGCAATAGAACGGGACCCAACCACGCACCAGTGGttt                                                                          >  2:196412/1‑150 (MQ=255)                                             tGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTg                                                                         <  1:676213/150‑1 (MQ=255)                                                              aaGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTGGCCAAAGCCCGcagcag                                                        >  1:467590/1‑150 (MQ=255)                                                                    cTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTcc                                                                                              <  1:723650/106‑1 (MQ=255)                                                                    cTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTcc                                                                                              >  2:723650/1‑106 (MQ=255)                                                                         gggTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTGGCCAAAGCCCGCAGCAGGCTGGCATTAc                                             <  2:467590/150‑1 (MQ=255)                                                                                gCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTGGCGCAAGCCCGCAGCAGGCTGGCATTACCCCCACg                                      >  2:29627/1‑150 (MQ=255)                                                                                 ccACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCcgtggcagggcatacgccctgaacagct                                                                                                                        <  1:546540‑M1/67‑29 (MQ=255)                                                                                 ccACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCcgtggcagggcatacgccctgaacagct                                                                                                                        >  2:546540‑M1/1‑39 (MQ=255)                                                                                  cacaGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTg                                                                         <  2:182507/113‑1 (MQ=255)                                                                                  cacaGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTg                                                                         >  1:182507/1‑113 (MQ=255)                                                                                  cacaGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTGGCCAAAGCCCGCAGCAGGCTGGCATTACCCCCACGAc                                    <  1:196412/150‑1 (MQ=255)                                                                                   acaGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCa                                                                                                           <  1:704155/78‑1 (MQ=255)                                                                                   acaGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCa                                                                                                           >  2:704155/1‑78 (MQ=255)                                                                                             cAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCa                                                                                                           <  2:36617/68‑1 (MQ=255)                                                                                             cAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCa                                                                                                           >  1:36617/1‑68 (MQ=255)                                                                                                ggTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTGGCCAAAGCCCGCAGCAGGCTGGCATTACCCCCACGACCGTCGCCACGCTCg                      >  1:379681/1‑150 (MQ=255)                                                                                                        gCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTGGCCAAAGCCCGCAGCAGGCTGGCATTACCCCCACGACCGTCGCCACGCTCGACCCGcaa              <  1:79136/150‑1 (MQ=255)                                                                                                                 cTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTGGCCAAAGCCCGCAGCAGGCTGGCATTACCCCCACGACCGTCGCCACGCTCGACCCGCCACAACGCcaa     >  2:617301/1‑149 (MQ=255)                                                                                                                  tGCAGCTGTTCAGGGCGTATGCCCTGCCACGgctgcaggccatgagcaatgaaccttggcgcacctgtggcgacacccgcgagcgccttgagctgctggcactgcaggtgatcgggcaggcattggagggcacggcacagttacccgacc    <  2:275199‑M2/150‑120 (MQ=255)                                                                                                                    cAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTGGCCAAAGCCCGCAGCAGGCTGGCATTACCCCCACGACCGTCGCCACGCTCGACCCGCAACAACGCcagcag  <  2:670960/150‑1 (MQ=255)                                                                                                                     aGCTGTTCAGGGCGTATGCCCTGCCACGgctgcaggccatgagcaatgaaccttggcgcacctgtgg                                                                                    <  1:546540‑M2/67‑40 (MQ=255)                                                                                                                     aGCTGTTCAGGGCGTATGCCCTGCCACGgctgcaggccatgagcaatgaaccttggcgcacctgtgg                                                                                    >  2:546540‑M2/1‑28 (MQ=255)                                                                                                                       |                                                                                                                                                   GGTCGGGTAACTGTGCCGTGCCCTCCAATGCCTGCCCGATCACCTGCAGTGCCAGCAGCTCAAGGCGCTCGCGGGTGTCGCCACAGGTGCGCCAAGGTTCATTGCTCATGGCCTGCAGCTGTTCAGGGCGTATGCCCTGCCACGGCTGCCCAAGGTCGCAGTCGAGCGGGTCCCAGCCCGGCACCAGTGCTTTGGCCAAAGCCCGCAGCAGGCTGGCATTACCCCCACGACCGTCGCCACGCTCGACCCGCAACAACGCCAGCAG  >  NC_002947/3978286‑3978550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.