New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2957115 =	20 (0.710)	6 (0.240)	6/216	NT	29.6%	intergenic (+27/‑169)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	2957202 =	11 (0.440)					intergenic (+114/‑82)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein

TAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCC  >  NC_002947/2957054‑2957337                                                                                                                                                     |                                                                                                                                        tAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACagag                                                                                                                                        >  2:523141/1‑150 (MQ=255) tAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACagag                                                                                                                                        <  1:518992/150‑1 (MQ=255)                             gCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtgtg                                                                                                            >  1:487858/1‑150 (MQ=255)                                gTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTa                                                                                                         <  2:362820/150‑1 (MQ=255)                                 tAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTAc                                                                                                        <  1:383097/150‑1 (MQ=255)                                   aGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCt                                                                                                      <  1:523141/150‑1 (MQ=255)                                     ccGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGt                                                                                                    <  1:480251/150‑1 (MQ=255)                                                   aaCGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaagaa                                                                                      >  2:749145/1‑150 (MQ=255)                                                                GTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTAGCTTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCacgac                                                                         >  1:7856‑M1/1‑150 (MQ=255)                                                                     AGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCg                                                                    <  1:221383‑M1/150‑1 (MQ=255)                                                                         GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTg                                                                >  2:487858‑M1/1‑150 (MQ=255)                                                                         GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCAACAGAGGGAGTGCGGCGTGCGTGCTGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTg                                                                >  1:655990‑M1/1‑150 (MQ=255)                                                                            atgcccgcgaatcaggcgacacggtggatggcaccggcttcgccggtgttcgcgggcgtgcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAg                                                             >  1:548211‑M2/74‑150 (MQ=255)                                                                            atgcccgcgaatcaggcgacacggtggatggcaccggcttcgccggtgttcgcgggcgtgcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAg                                                             <  2:548211‑M2/77‑1 (MQ=255)                                                                                ccgcgaatcaggcgacacggtggatggcaccggcttcgccggtgttcgcgggcgtgcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGttt                                                                 >  1:639295‑M2/70‑142 (MQ=255)                                                                                ccgcgaatcaggcgacacggtggatggcaccggcttcgccggtgttcgcgggcgtgcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGttt                                                                 <  2:639295‑M2/73‑1 (MQ=255)                                                                                      atcaggcggctcggtggatggcaccggcttcgccggtgttcgcgggcgtgcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACtgtg                                                                                                              <  1:352540‑M2/28‑1 (MQ=255)                                                                                      atcaggcgacacggtggatggcaccggcttcgccggtgttcgcgggcgtgcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACtgtg                                                                                                              >  2:352540‑M2/64‑91 (MQ=255)                                                                                           ggCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTaca                                                 >  2:75974/1‑147 (MQ=255)                                                                                           ggCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTaca                                                 <  1:75974/147‑1 (MQ=255)                                                                                                    ggTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGTACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCt                                     <  1:219839/150‑1 (MQ=255)                                                                                                                cGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAAcgcg                         >  2:201421/1‑150 (MQ=255)                                                                                                                              cgcgGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTAc           <  1:749145/150‑1 (MQ=255)                                                                                                                                       gcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCTCCACGACGGTCGTTTGGAGTACAAATGTa                                                   <  2:190300‑M2/87‑1 (MQ=255)                                                                                                                                       gcccgctcccacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCTCCACGACGGTCGTTTGGAGTACAAATGTa                                                   >  1:190300‑M2/15‑101 (MQ=255)                                                                                                                                       gccagctaccacagCGGGAGTTCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGcc  >  2:727904‑M2/15‑150 (MQ=255)                                                                                                                                                cacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGaa                                         >  2:194895‑M2/6‑102 (MQ=255)                                                                                                                                                cacagAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGaa                                         <  1:194895‑M2/97‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                        TAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCTTCCGGCC  >  NC_002947/2957054‑2957337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.