New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 249852226 (1.120)5 (0.230) 4/238 NT 17.6% coding (380/2454 nt) PP_2193 ferric siderophore receptor
?NC_002947 = 2498539 22 (1.000)coding (397/2454 nt) PP_2193 ferric siderophore receptor

GCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2498396‑2498522
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgGCGCGGCCTCGGCCTTGCGCAGGGTGACGGTGCGAGCCTCGCTGAACTGCCAGCTCATGCCGCTGCCGGCCAGCAACTGCTGCAGGGCCTGCTCGACACTGTAGTTGCCCTGCAACGCCGGGCTGACCTGGCCGGCGACATCGCCTGTG  <  NC_002947/2498539‑2498391
                                                                                                                                                                                                                                                                                    
GCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGGCGCGGCCTCGGCCTTGCGCAGG                                                                                                                                <  1:448490/150‑1
                                 AGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGGCGCGGCCTCGGCCTTGCGCAGGGTGACGG                                                                                                                         >  1:512298/1‑124
                                 AGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGGCGCGGCCTCGGCCTTGCGCAGGGTGACGG                                                                                                                         <  2:512298/124‑1
                                                                        TGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGGCGCGGCCTCGGCCTTGCGCAGG                                                                                                                                >  1:77414/1‑78
                                                                        TGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGGCGCGGCCTCGGCCTTGCGCAGG                                                                                                                                <  2:77414/78‑1
                                                                                                                              GGCGCGGCCTCGGCCTTGCGCAGGGTGACGGTGCGAGCCTCGCTGAACTGCCAGCTCATGCCGCTGCCGGCCAGCAACTGCTGCAGGGCCTGCTCGACACTGTAGTTGCCCTGCAACGCCGGGCTGACCTGGCCGGCGACATCGCCTGTG  <  1:563848/150‑1
                                                                                                                                                                                                                                                                                    
GCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2498396‑2498522
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgGCGCGGCCTCGGCCTTGCGCAGGGTGACGGTGCGAGCCTCGCTGAACTGCCAGCTCATGCCGCTGCCGGCCAGCAACTGCTGCAGGGCCTGCTCGACACTGTAGTTGCCCTGCAACGCCGGGCTGACCTGGCCGGCGACATCGCCTGTG  <  NC_002947/2498539‑2498391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.