New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2498522 | 26 (1.120) | 5 (0.230) | 4/238 | NT | 17.6% | coding (380/2454 nt) | PP_2193 | ferric siderophore receptor |
? | NC_002947 | = 2498539 | 22 (1.000) | coding (397/2454 nt) | PP_2193 | ferric siderophore receptor |
GCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2498396‑2498522 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgGCGCGGCCTCGGCCTTGCGCAGGGTGACGGTGCGAGCCTCGCTGAACTGCCAGCTCATGCCGCTGCCGGCCAGCAACTGCTGCAGGGCCTGCTCGACACTGTAGTTGCCCTGCAACGCCGGGCTGACCTGGCCGGCGACATCGCCTGTG < NC_002947/2498539‑2498391 GCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGGCGCGGCCTCGGCCTTGCGCAGG < 1:448490/150‑1 AGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGGCGCGGCCTCGGCCTTGCGCAGGGTGACGG > 1:512298/1‑124 AGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGGCGCGGCCTCGGCCTTGCGCAGGGTGACGG < 2:512298/124‑1 TGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGGCGCGGCCTCGGCCTTGCGCAGG > 1:77414/1‑78 TGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGGCGCGGCCTCGGCCTTGCGCAGG < 2:77414/78‑1 GGCGCGGCCTCGGCCTTGCGCAGGGTGACGGTGCGAGCCTCGCTGAACTGCCAGCTCATGCCGCTGCCGGCCAGCAACTGCTGCAGGGCCTGCTCGACACTGTAGTTGCCCTGCAACGCCGGGCTGACCTGGCCGGCGACATCGCCTGTG < 1:563848/150‑1 GCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2498396‑2498522 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgGCGCGGCCTCGGCCTTGCGCAGGGTGACGGTGCGAGCCTCGCTGAACTGCCAGCTCATGCCGCTGCCGGCCAGCAACTGCTGCAGGGCCTGCTCGACACTGTAGTTGCCCTGCAACGCCGGGCTGACCTGGCCGGCGACATCGCCTGTG < NC_002947/2498539‑2498391 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |