New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2668066 = | 20 (0.870) | 5 (0.280) | 5/190 | NT | 27.6% | intergenic (+41/‑126) | prpF/prpD | aconitate isomerase/2‑methylcitrate dehydratase |
? | NC_002947 | 2668155 = | 11 (0.630) | intergenic (+130/‑37) | prpF/prpD | aconitate isomerase/2‑methylcitrate dehydratase |
TCGTAATCCGGGCGATCGTTGAGGTCTACGTTGGCGCTCATATCCAGCTCCCTTCAGAATTGCCGGGGCTGCTGTGCAGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAAGCCCGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2668232‑2668066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcaagcccgcgaagggcTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGA > NC_002947/2668155‑2668280 TCGTAATCCGGGCGATCGTTGAGGTCTACGTTGGCGCTCATATCCAGCTCCCTTCAGAATTGCCGGGGCTGCTGTGCAGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGG < 2:527091/150‑1 ATCCGGGCGATCGTTGAGGTCTACGTTGGCGCTCATATCCAGCTCCCTTCAGAATTGCCGGGGCTGCTGTGCAGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAAG > 1:329420/1‑150 cGGCGATCGTTGAGGTCTACGTTGGCGCTCATATCCAGCTCCCTTCAGAATTGCCGGGGCTGCTGTGCAGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAAGCCCG > 2:421926/2‑150 GATCGTTGAGGTCTACGTTGGCGCTCATATCCAGCTCCCTTCAGAATTGCCGGGGCTGCTGTGCAGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAAGCCCGCGAA < 2:329420/150‑1 GTTGAGGTCTACGTTGGCGCTCATATCCAGCTCCCTTCAGAATTGCCGGGGCTGCTGTGCAGCCCTTCGCGGGCGTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGATTCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGC > 1:591391/1‑150 CCGGGGCTGCTGTGCAGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAA < 1:476903/92‑1 CCGGGGCTGCTGTGCAGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAA > 2:476903/1‑92 CCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGAC < 1:365740/127‑1 CCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGAC > 2:365740/1‑127 CCACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGT > 2:39608/1‑150 ACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGC < 1:39608/150‑1 ACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCCGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACATCAACGATCGCCCGGATTACGACCGGGTGC > 1:557530/1‑150 TGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATAT > 1:431477/1‑67 TGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATAT < 2:431477/67‑1 GGATCGGGCAGGCGCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGTATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGA < 1:516938/150‑1 TCGTAATCCGGGCGATCGTTGAGGTCTACGTTGGCGCTCATATCCAGCTCCCTTCAGAATTGCCGGGGCTGCTGTGCAGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGATTACCTGTGGGAGCGGGCAAGCCCGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2668232‑2668066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcaagcccgcgaagggcTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGA > NC_002947/2668155‑2668280 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |