New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3963032 | 12 (0.520) | 4 (0.190) | 3/228 | NT | 19.1% | intergenic (+34/+83) | PP_3492/PP_3493 | acyl‑CoA dehydrogenase/LysR family transcriptional regulator |
? | NC_002947 | = 3963072 | 23 (1.090) | intergenic (+74/+43) | PP_3492/PP_3493 | acyl‑CoA dehydrogenase/LysR family transcriptional regulator |
GGTTATCTGGAAGATTACCCGGTGGAGCGCTATTACCGGGATGCGCGGATTACCCAGATCTATGAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3962873‑3963032 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcgCGCCCGCGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTCGCCCGCTCCCCCAAAAACCGCGTTGCCTTTGCGTTACAGCGGATAGTTTTTCAATTCCCGCGCAATCAGCATCCGCTGGATCTCGCTCGACCCTTCATAGATCTGG < NC_002947/3963072‑3962926 GGTTATCTGGGAGATTACCCGGTGGAGCGCTATTACCGGGATGCTCGGTTTACCCAGATCTATGAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGG < 1:41553/150‑1 GTTATCTGGAAGATTACCCGGTGGAGCGCTATTACCGGGATGCGCGGATTACCCAGATCTATGAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGG < 2:422463/150‑1 ATCTGGAAGATTACCCGGTGGAGCGCTATTACCGGGATGCGCGGATTACCCAGATCTATGAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAG > 2:214582/1‑150 CTGGAAGATTACCCGGTGGAGCGCTATTACCGGGATGCGCGGATTACCCAGATCTATGAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGTCAACGCGGTTTTTGGGGGAGCG < 1:8079/150‑1 ACCCAGATCTATGAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTC < 2:467848/150‑1 ACCCAGATCTATGAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGCGCCCGAGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTC < 1:476251/150‑1 AAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTCGCCCGCTC < 1:487549/100‑1 AAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTCGCCCGCTC > 2:487549/1‑100 GAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTCGCCCGCTCCCCCAAAAACCGCGTTGCCTTTGCGTTACAGCG < 1:230156/91‑1 GAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTCGCCCGCTCCCCCAAAAACCGCGTTGCCTTTGCGTTACAGCG > 2:230156/1‑91 CGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTCGCCCGCTCCCCCAAAAACCGCGTTGCCTTTGCGTTACAGCGGATAGTTTTTCAATTCCCGCGCAATCAGCATCCGCTGGATCTCGCTCGACCCTTCATAGATC < 1:456478/150‑1 GGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTCGCCCGCTCCCCCAAAAACCGCGTTGCCTTTGCGTTACAGCGGATAGTTTTTCAATTCCCCCGCAATCAGCATCCGCTGGATCTCGCTCGACCCTTCATAGATCT > 2:444921/1‑150 GCGCGCCCGCGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTCGCCCGCTCCCCCAAAAACCGCGTTGCCTTTGCGTTACAGCGGATAGTTTTTCAATTCCCGCGCAATCAGCATCCGCTGGATCTCGCTCGACCCTTCATAGATCTGG > 1:283047/1‑150 GCGCCCCCTCGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTCGCCCGCTCCCCCAAAAACCGCGTTGCCTTTGCGTTACAGCGGATAGTTTTTCAATTCCCGCGCAATCAGCATCCGCTGGATCTCGCTCGACCCTTCATAGATCTGG < 1:165776/150‑1 GGTTATCTGGAAGATTACCCGGTGGAGCGCTATTACCGGGATGCGCGGATTACCCAGATCTATGAAGGGTCGAGCGAGATCCAGCGGATGCTGATTGCGCGGGAATTGAAAAACTATCCGCTGTAACGCAAAGGCAACGCGGTTTTTGGGGGAGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3962873‑3963032 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcgCGCCCGCGAACACCGGCAAAGCCGGTGCCCTCCACCGCGTCGCCCGCTCCCCCAAAAACCGCGTTGCCTTTGCGTTACAGCGGATAGTTTTTCAATTCCCGCGCAATCAGCATCCGCTGGATCTCGCTCGACCCTTCATAGATCTGG < NC_002947/3963072‑3962926 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |