New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4755180 | 25 (1.080) | 4 (0.190) | 4/232 | NT | 14.5% | coding (376/1965 nt) | pvdT | pyoverdine ABC transporter ATP‑binding protein/permease |
? | NC_002947 | = 4755205 | 24 (1.120) | coding (401/1965 nt) | pvdT | pyoverdine ABC transporter ATP‑binding protein/permease |
CCGCGAGGCCTTCGGGTTCGTGTTCCAGGGCTACCACCTGATCCCCTCCGGCTCAGCCCAGGAAAACGTCGAGATGCCAGCCATCTACGCCGGTACCCCAGCCGCCGAACGCCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4755062‑4755180 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggcccAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGCGTTC < NC_002947/4755205‑4755168 CCGCGAGGCCTTCGGGTTCGTGTTCCAGGGCTACCACCTGATCCCCTCCGGCTCAGCCCAGGAAAACGTCGAGATGCCAGCCATCTACGCCGGTACCCCAGCCGCCGAACGCCAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCT > 2:507683/1‑150 GCGAGGCCTTCGGGTTCGTGTTCCAGGGCTACCACCTGATCCCCTCCGGCTCAGCCCAGGAAAACGTCGAGATGCCAGCCATCTACGCCGGTACCCCAGCCGCCGAACGCCAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGG < 1:507683/150‑1 TTCGGGTTCGTGTTCCAGGGCTACCACCTGATCCCCTCCGGCTCAGCCCAGGAAAACGTCGAGATGCCAGCCATCTACGCCGGTACCCCAGCCGCCGAACGCCAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGCGTTC < 1:514242/147‑1 TTCGGGTTCGTGTTCCAGGGCTACCACCTGATCCCCTCCGGCTCAGCCCAGGAAAACGTCGAGATGCCAGCCATCTACGCCGGTACCCCAGCCGCCGAACGCCAGGCCCAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGCGTTC > 2:514242/1‑147 CCGCGAGGCCTTCGGGTTCGTGTTCCAGGGCTACCACCTGATCCCCTCCGGCTCAGCCCAGGAAAACGTCGAGATGCCAGCCATCTACGCCGGTACCCCAGCCGCCGAACGCCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4755062‑4755180 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggcccAGGCGGCCGAGCAGGGCGCTGGCGCGGGCCTGGCGTTC < NC_002947/4755205‑4755168 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |