New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5328097 | 21 (0.910) | 4 (0.180) | 3/236 | NT | 18.3% | coding (290/1038 nt) | PP_4688 | heme/hemin ABC transporter permease |
? | NC_002947 | = 5328132 | 16 (0.730) | coding (255/1038 nt) | PP_4688 | heme/hemin ABC transporter permease |
ACCAGCGCAGTTACCCCAAGCCCGCCGACAAACGCGCAGAACGACAGCAGATAAGGCGCGAAAGCATCCGGCATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5327944‑5328097 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggggtGGCCATGCAGGGGCTGTTCCGCAACCCGCTGGCCGACCCCG < NC_002947/5328132‑5328092 ACCAGCGCAGTTACCCAAAGCCAGCCGACAAACGCGCAGAACGACAGCAGATAAGGCGCGAAAGCATCCGGCATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCG > 2:588477/1‑150 AGCGCAGTTACCCCAAGCCCGCCGACAAACGCGCAGAACGACAGCAGATAAGGCGCGAAAGCATCCGGCATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGG > 2:159987/1‑150 CGACAGCAGATAAGGCGCGAAAGCATCCGGCATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTGGCCATGCAGGGGCTGTTCCGCAACCCGCTGGCCGAC < 1:61081/150‑1 CGACAGCAGATAAGGCGCGAAAGCATCCGGCATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTGGCCATGCAGGGGCTGTTCCGCAACCCGCTGGCCGAC < 2:612739/150‑1 ACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCATCCCGGGGTGGCCATGCAGGGGCTGTTCCGCAACCCGCTGGCCGACCCCG < 1:168851/99‑1 ACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGTGGCCATGCAGGGGCTGTTCCGCAACCCGCTGGCCGACCCCG > 2:168851/1‑99 ACCAGCGCAGTTACCCCAAGCCCGCCGACAAACGCGCAGAACGACAGCAGATAAGGCGCGAAAGCATCCGGCATGCCGCCAAACCAGGCGCCGCCGACAATGGCAACCGCTGCCCCCACTGCGGCGCCGGCGGCAACCCCTACCAGCCCGGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5327944‑5328097 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggggtGGCCATGCAGGGGCTGTTCCGCAACCCGCTGGCCGACCCCG < NC_002947/5328132‑5328092 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |