| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5542790 | 9 (0.390) | 4 (0.180) | 4/234 | NT | 32.8% | intergenic (‑44/+70) | dnaB/rplI | replicative DNA helicase/50S ribosomal protein L9 |
| ? | NC_002947 | = 5542806 | 8 (0.370) | intergenic (‑60/+54) | dnaB/rplI | replicative DNA helicase/50S ribosomal protein L9 | |||||
TTGTCCAGCATCAGGCCACCGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTGCAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5542634‑5542790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcacggTCCTGTTTTCGACAGG‑CCGTGCCCTTTGTCTTTTTCATCCTCCAGAATTCTTTCGTGGCCATGAACGAGATCACCACCTCCGAACAGCTTGACCTGCAAACCGCAGCCCTGAAGGTACCGCCGCATTCCATCGAGGCCGAACAGGCCG < NC_002947/5542806‑5542659 gTGTCCAGCATCAGGCCAGCGAGCACGGCCTGTTCGGCCTCGATGGAATGTGGCGGTATCTTCCGGGCTGCGGTTTGCAGGTCAAGCGGTTCGGAGGTGGTGGTCTCGGTCATGGCCACGGAAGAAGTCTGGAGCATGAAAAAGACAAAG < 2:545367/149‑1TTGTCCAGCATCAGGCCACCGAGCAAGGCGTGTTCGGCCTCGATGGAAGGCGGCGGTACCTTCAGGGCTGCGGTTTGCAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAG > 1:545367/1‑150 GTCCAGCATCAGGCCACCGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTGCAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGG < 2:554857/150‑1 CCAGCATCAGGCCACAGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCAGTTTGCAGGTCAAGCTGTTCGGAGGTGGTGATCTNGTTCATNGCCACGCAAGAATTCTGGAGGATGAAAAAGACAAAGGGCA < 1:500995/150‑1 GCCTGTTCGTCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTGCAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGTCCTGTTTTCGACAGG‑CCGT < 1:252499/150‑1 TGGTTATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGTCCTGTTTTCGACAGG‑CCGTGCC < 1:319709/83‑1 TGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGGTCCTGTTTTCGACAGG‑CCGTGCC > 2:319709/1‑83 AAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGG‑CCTGTCGAAAACAGGACCGTGCCCTTTGTCTTTTTCATCCTCCAGAATTCTTTCGTGGCCATGAACGAGATCACCACCTCCGAACAGCTTGACCTGCAAACCGCAGCCCTGAAG > 2:338146/1‑150 GGTCCTGTTTTCGACAGG‑CCGTGCCCTTTGTCTTTTTCATCCTCCAGAATTCTTTCGTGGCCATGAACGAGATCACCACCTCCGAACAGCTTGACCTGCAAACCGCAGCCCTGAAGGTACCGCCGCATTCCATCGAGGCCGAACAGGCCG > 2:335334/1‑150 TTGTCCAGCATCAGGCCACCGAGCACGGCCTGTTCGGCCTCGATGGAATGCGGCGGTACCTTCAGGGCTGCGGTTTGCAGGTCAAGCTGTTCGGAGGTGGTGATCTCGTTCATGGCCACGAAAGAATTCTGGAGGATGAAAAAGACAAAGGGCACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5542634‑5542790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcacggTCCTGTTTTCGACAGG‑CCGTGCCCTTTGTCTTTTTCATCCTCCAGAATTCTTTCGTGGCCATGAACGAGATCACCACCTCCGAACAGCTTGACCTGCAAACCGCAGCCCTGAAGGTACCGCCGCATTCCATCGAGGCCGAACAGGCCG < NC_002947/5542806‑5542659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |