New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 142138 | 27 (1.170) | 4 (0.180) | 3/238 | NT | 14.1% | coding (82/822 nt) | PP_0134 | hypothetical protein |
? | NC_002947 | = 142157 | 23 (1.050) | coding (101/822 nt) | PP_0134 | hypothetical protein | |||||
Rejected: Coverage evenness skew score above cutoff. |
TGCTTAGAGGCACGCGCTGGCACATTGGTTGCGATGATTTTCAGATTTTGCCCACGAAGGAGGCGCTGTCATGCCCTTTTCCCTGCGTACAGCCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/141987‑142138 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggGCGCCTTCCAGGCGCGCGTCCTGCACAGGGTCGGCGAATGCCGGGGTAAAGATTGGCAGCAGGGTGGCGGCCAAAACGGCTGTACGCAGGGAAAAGGGCATGACAGCGCCTCCTTCGTGGGCAAAATCTGAAAATCATCGCAACCAATG < NC_002947/142157‑142009 TGCTTAGAGGCACGCGCTGGCACATTGGTTGCGATGATTTTCAGATTTTGCCCACGAAGGAGGCGCTGTCATGCCCTTTTCCCTGCGTACAGCCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCA < 1:166800/150‑1 ATGCCCTTTTCCCTGCGTACAGCCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGGGCGCCTTCCAGGCGCGCGTCCTGCACA > 1:274420/1‑109 ATGCCCTTTTCCCTGCGTACAGCCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGGGCGCCTTCCAGGCGCGCGTCCTGCACA < 2:274420/109‑1 CCTTTTCCCTGCGTACAGCCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGGGCGCCTTCCAGGCGCGCGTCCTGCACA < 1:240127/105‑1 CCTTTTCCCTGCGTACAGCCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGGGCGCCTTCCAGGCGCGCGTCCTGCACA > 2:240127/1‑105 AGGGCGCCTTCCAGGCGCGCGTCCTGCACAGGGTCGGCGAATGCCGGGGTAAAGATTGGCAGCAGGGTGGCGGCCAAAACGGCTGTACGCAGGGAAAAGGGCATGACAGCGCCTCCTTCGTGGGCAAAATCTTAAAATCATCGCAACCAA < 2:70930/150‑1 GGGCGCCTTCCAGGCGCGCGTCCTGCACAGGGTCGGCGAATGCCGGGGTAAAGATTGGCAGCAGGGTGGCGGCCAAAACGGCTGTACGCAGGGAAAAGGGCATGACAGCGCCTCCTTCGTGGGCAAAATCTGAAAATCATCGCAACCAAT > 2:62512/1‑150 GGCGCCTTCCAGGCGCGCGTCCTGCACAGGGTCGGCGAATGCCGGGGTAAAGATTGGCAGCAGGGTGGCGGCCAAAACGGCTGTACGCAGGGAAAAGGGCATGACAGCGCCTCCTTCGTGGGCAAAATCTGAAAATCATCGCAACCAATG > 1:101020/1‑150 TGCTTAGAGGCACGCGCTGGCACATTGGTTGCGATGATTTTCAGATTTTGCCCACGAAGGAGGCGCTGTCATGCCCTTTTCCCTGCGTACAGCCGTTTTGGCCGCCACCCTGCTGCCAATCTTTACCCCGGCATTCGCCGACCCTGTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/141987‑142138 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggGCGCCTTCCAGGCGCGCGTCCTGCACAGGGTCGGCGAATGCCGGGGTAAAGATTGGCAGCAGGGTGGCGGCCAAAACGGCTGTACGCAGGGAAAAGGGCATGACAGCGCCTCCTTCGTGGGCAAAATCTGAAAATCATCGCAACCAATG < NC_002947/142157‑142009 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |