New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 837845 | 15 (0.650) | 4 (0.180) | 4/240 | NT | 21.4% | coding (123/585 nt) | pth | peptidyl‑tRNA hydrolase |
? | NC_002947 | = 837864 | 15 (0.680) | coding (104/585 nt) | pth | peptidyl‑tRNA hydrolase |
AACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/837788‑837845 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgCCCAGCGTGTTTCGCTGACCGCTGACAAAA < NC_002947/837864‑837835 AACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGCCCAGCGTGTTTCGC > 1:127251/1‑73 AACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGCCCAGCGTGTTTCGC < 2:127251/73‑1 CCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGCCCAGCGTGTTTCGCTGACCGCTGACAAAA > 1:574644/1‑78 CCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGCCCAGCGTGTTTCGCTGACCGCTGACAAAA < 2:574644/78‑1 AACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/837788‑837845 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgCCCAGCGTGTTTCGCTGACCGCTGACAAAA < NC_002947/837864‑837835 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |