New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1769892	18 (0.780)	4 (0.180)	4/238	NT	18.1%	coding (598/3000 nt)	PP_1579	hypothetical protein
	?	NC_002947	= 1769914	19 (0.860)					coding (620/3000 nt)	PP_1579	hypothetical protein

CCCGCTTCGTGAACCAGCGTGAACTTCACACCAGCCTGTGCTTGTGCGTGGGAGCGGGCTCGCACTCGATCTTGCCCAGCAGCATCAAGATCGGAGATACCCCGCTGGCTGCCTTCGGCGCCGATGTGTCGTATGCGTTCTACGGACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1769743‑1769892 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccggAGATCGCCGGCAAGGCTCTCCCCCGGTCCGTAGAACGCATACGACACATCGGCGCCGAAGGCAGCCAGCGGGGTATCTCCGATCTTGATGCTGCTGGGCAAGATCGAGTGCGAGCCCGCTCCCACGCACAAGCACAGGCTGGTGTGA  <  NC_002947/1769914‑1769768                                                                                                                                                                                                                                                                                                           CCCGCTTCGTGAACCAGCGTGAACTTCACACCAGCCTGTGCTTGTGCGTGGGAGCGGGCTCGCACTCGATCTTGCCCAGCAGCATCAAGATCGGAGATACCCCGCTGGCTGCCTTCGGCGCCGATGTGTCGTATGCGTTCTACGGACCGG                                                                                                                                                     <  1:531642/150‑1                                                                ACTCGATCTTGCCCATCAGCATCAAGATCGGAGATACCCCGCTGGCTGCCTTCGGCGCCGATGTGTCGTATGCGTTCTACGGACCGGAGATCGCCGGCAAGGCTCTCCCCCGGTC                                                                                                                         <  2:67444/115‑1                                                                ACTCGATCTTGCCCAGCAGCATCAAGATCGGAGATACCCCGCTGGCTGCCTTCGGCGCCGATGTGTCGTATGCGTTCTACGGACCGGAGATCGCCGGCAAGGCCCTCCCCCGGTC                                                                                                                         >  1:67444/1‑115                                                                                                    CCCCGCTTGCTGCCTTCGGCGCCGATGTGTCGTATGCGTTCTACGGACCGGAGATCGCCGGCAAGGCTCTCCCCCGGTCC                                                                                                                        >  1:181355/1‑80                                                                                                    CCCCGCTGGCTGCCTTCGGCGCCGATGTGTCGTATGCGTTCTACGGACCGGAGATCGCCGGCAAGGCTCTCCCCCGCTCC                                                                                                                        <  2:181355/80‑1                                                                                                                                                  ACCGGAGATCGCCGGCAAGGCTCTCCCCCGGTCCGTAGAACGCATACGACACATCGGCGCCGAAGGCAGCCAGCGGGGTATCTCCGATCTTGATGCTGCTGGGCAAGATCGAGTGCGAGCCCGCTCCCACGCACAAGCACAGGCTGGTGT    >  1:595766/1‑150                                                                                                                                                    ctGAGATCGCCGGCAAGGCTCTCCCCCGGTCCGTAGAACGCATACGACACATCGGCGCCGAAGGCAGCCAGCGGGGTATCTCCGATCTTGATGCTGCTGGGCAAGATCGAGT                                        >  1:397085/3‑112                                                                                                                                                    CGGAGATCGCCGGCAAGGCTCTCCCCCGGTCCGTAGAACGCATACGACACATCGGCGCCGAAGGCAGCCAGCGGGGTATCTCCGATCTTGATGCTGCTGGGCAAGATCGAGT                                        <  2:397085/112‑1                                                                                                                                                    CGGAGATCGCCGGCAAGGCTCTCCCCCGGAGAGTAGAACGCATACGGCACATCGGCGCCGAAGGCAGCCAGCGGGGTATCTCCGATCTTGATGCTGCTGGGCAAGATCGAGTGCGAGCCCGCTCCCACGCACAAGCACATGCTGGTGTGA  >  1:273689/1‑150                                                                                                                                                                                                                                                                                                           CCCGCTTCGTGAACCAGCGTGAACTTCACACCAGCCTGTGCTTGTGCGTGGGAGCGGGCTCGCACTCGATCTTGCCCAGCAGCATCAAGATCGGAGATACCCCGCTGGCTGCCTTCGGCGCCGATGTGTCGTATGCGTTCTACGGACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1769743‑1769892 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccggAGATCGCCGGCAAGGCTCTCCCCCGGTCCGTAGAACGCATACGACACATCGGCGCCGAAGGCAGCCAGCGGGGTATCTCCGATCTTGATGCTGCTGGGCAAGATCGAGTGCGAGCCCGCTCCCACGCACAAGCACAGGCTGGTGTGA  <  NC_002947/1769914‑1769768

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.