New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1794713 =17 (0.740)4 (0.180) 4/236 NT 20.5% coding (1889/2361 nt) bamA‑I outer membrane protein assembly factor
?NC_002947 1794737 = 15 (0.690)coding (1913/2361 nt) bamA‑I outer membrane protein assembly factor

ATCCGGGTCGGCGATGGTGCCTGGCTTGCCACCTGCGGCCTCACCGATGCTCGGGGTACTGCGCGGGCCCAGGCTGCTGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAGACCGGAGGTGCTGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1794867‑1794713
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccgtTCTACGAGAACTATTTCGCGGGTGGTTTCAACTCCGTCCGTGGCTTCAAGGACAGCAGCCTGGGCCCGCGCAGTACCCCGAGCATCGGTGAGGCCGCAGGTGGCAAGCCAGGCACCATCGC  >  NC_002947/1794737‑1794857
                                                                                                                                                                                                                                                                                     
ATCCGGGTCGGCGATGGTGCCTGGCTTGCCACCTGCGGCCTCACCGATGCTCGGGGTACTGCGCGGGCCCAGGCTGCTGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAGACCGGAGGTGCT                                                                                                                                >  1:543367/1‑150
                                    GGCCTCACCGATGCTCGGGGTACTGCGCGGGCCCAGGCTGCTGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAGCACCTCCGGTCTGCCGTTCTACGAGAACTATTTCGCGGGTGGTTTCAA                                                                                            <  2:31995/150‑1
                                                                             TGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAGCACCTCCGGTCTGCCGTTCTACGAGAACTATTTCGCGG                                                                                                      <  1:495293/99‑1
                                                                             TGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAGCACCTCCGGTCTGCCGTTCTACGAGAACTATTTCGCGG                                                                                                      >  2:495293/1‑99
                                                                                                                              GTAGAACGGCAGACCGGAGGTGCTGCCGTTCTACGAGAACTATTTCGCGGGTGGTTTCAACTCCGTCCGTGGCTTCAAGGACAGCAGCCTGGGCCCGCGCAGTACCCCGCGCTACTGTGAGGCCGCAGGTGGCAAGCCAGGCACCATCGC  >  1:189377/1‑150
                                                                                                                                                                                                                                                                                     
ATCCGGGTCGGCGATGGTGCCTGGCTTGCCACCTGCGGCCTCACCGATGCTCGGGGTACTGCGCGGGCCCAGGCTGCTGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAGACCGGAGGTGCTGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1794867‑1794713
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccgtTCTACGAGAACTATTTCGCGGGTGGTTTCAACTCCGTCCGTGGCTTCAAGGACAGCAGCCTGGGCCCGCGCAGTACCCCGAGCATCGGTGAGGCCGCAGGTGGCAAGCCAGGCACCATCGC  >  NC_002947/1794737‑1794857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.