New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1794713 = | 17 (0.740) | 4 (0.180) | 4/236 | NT | 20.5% | coding (1889/2361 nt) | bamA‑I | outer membrane protein assembly factor |
? | NC_002947 | 1794737 = | 15 (0.690) | coding (1913/2361 nt) | bamA‑I | outer membrane protein assembly factor |
ATCCGGGTCGGCGATGGTGCCTGGCTTGCCACCTGCGGCCTCACCGATGCTCGGGGTACTGCGCGGGCCCAGGCTGCTGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAG‑ACCGGAGGTGCTGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1794867‑1794713 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccgtTCTACGAGAACTATTTCGCGGGTGGTTTCAACTCCGTCCGTGGCTTCAAGGACAGCAGCCTGGGCCCGCGCAGTACCCCGAGCATCGGTGAGGCCGCAGGTGGCAAGCCAGGCACCATCGC > NC_002947/1794737‑1794857 ATCCGGGTCGGCGATGGTGCCTGGCTTGCCACCTGCGGCCTCACCGATGCTCGGGGTACTGCGCGGGCCCAGGCTGCTGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAG‑ACCGGAGGTGCT > 1:543367/1‑150 GGCCTCACCGATGCTCGGGGTACTGCGCGGGCCCAGGCTGCTGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAGCACCTCCGGT‑CTGCCGTTCTACGAGAACTATTTCGCGGGTGGTTTCAA < 2:31995/150‑1 TGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAGCACCTCCGGT‑CTGCCGTTCTACGAGAACTATTTCGCGG < 1:495293/99‑1 TGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAGCACCTCCGGT‑CTGCCGTTCTACGAGAACTATTTCGCGG > 2:495293/1‑99 GTAGAACGGCAG‑ACCGGAGGTGCTGCCGTTCTACGAGAACTATTTCGCGGGTGGTTTCAACTCCGTCCGTGGCTTCAAGGACAGCAGCCTGGGCCCGCGCAGTACCCCGCGCTACTGTGAGGCCGCAGGTGGCAAGCCAGGCACCATCGC > 1:189377/1‑150 ATCCGGGTCGGCGATGGTGCCTGGCTTGCCACCTGCGGCCTCACCGATGCTCGGGGTACTGCGCGGGCCCAGGCTGCTGTCCTTGAAGCCACGGACGGAGTTGAAACCACCCGCGAAATAGTTCTCGTAGAACGGCAG‑ACCGGAGGTGCTGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1794867‑1794713 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccgtTCTACGAGAACTATTTCGCGGGTGGTTTCAACTCCGTCCGTGGCTTCAAGGACAGCAGCCTGGGCCCGCGCAGTACCCCGAGCATCGGTGAGGCCGCAGGTGGCAAGCCAGGCACCATCGC > NC_002947/1794737‑1794857 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |