| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2595649 | 20 (0.870) | 3 (0.140) | 3/238 | NT | 13.3% | coding (325/1923 nt) | PP_2273 | DNA polymerase I |
| ? | NC_002947 | = 2595692 | 20 (0.910) | coding (368/1923 nt) | PP_2273 | DNA polymerase I | |||||
CCGACACCGGCCTCCTCAAGAAAGCAGTCCTCCCCGGCAAGCTCTTCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGACGTTGTCGTCACTTCCGCACTGTGGAAGCGAATCCTTGGCAAGAACTACTCGGCACGGGCCCTGGCGCTGGAACATCGCGTGGCCTGGCTCATGGCC > NC_002947/2595503‑2595798 | ccgacaccgGCCTCCTCAAGAAAGCAGTCCTCCCCGGCAAGCTCTTCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCTAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCa < 2:148557/150‑1 (MQ=255) ccgGCCTCCTCAAGAAAGCAGTCCTCCCCGGCACGCTCTTCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGt < 1:464432/150‑1 (MQ=255) ctcctcAAGAAAGCAGTCCTCCCCGGCAAGCTCTTCGGCTCCCACTCCTTGGAAGCCTGGGGATAACTCGGTCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTg < 1:195383/150‑1 (MQ=255) ctcctcAAGAAAGCAGTCCTCCCCGACAAGCTCTTCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTg < 1:255955/150‑1 (MQ=255) gCAGTCCTCCCCGGCAAGCTCTTCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCaa > 1:185866/1‑150 (MQ=255) cAGTCCTCCCCGGCAAGCTCTTCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAag > 2:559327/1‑150 (MQ=255) aGTCCTCCCCGGCAAGCTCTTCGGCTCCCACGCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAaga < 1:463532/150‑1 (MQ=255) tcctccCCGGCAAGCTCTTCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGcagtagtcgagcatctcttgcgagaactcc > 1:568238‑M1/1‑120 (MQ=255) ctctTCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGc < 1:14560‑M2/150‑2 (MQ=255) tctTCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTGTCGCAAGAGATGCTCGACTACTGcg < 2:62382‑M2/150‑3 (MQ=255) ctTCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGcgt > 2:185866‑M2/1‑147 (MQ=255) tCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGcagtagtcgagcatctcttgcgagaactccagccactccatgccgtcc < 2:46756‑M1/150‑49 (MQ=255) ctacaaCTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGa > 2:307103/6‑150 (MQ=255) cccACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGcagtagtcgagcatctcttgcgagaactccagccactccatgccgtccacgtag < 2:568238‑M1/150‑55 (MQ=255) cTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGACGTTgtcgt > 2:410672/1‑150 (MQ=255) ggAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTgg > 1:589720/1‑101 (MQ=255) ggAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTgg < 2:589720/101‑1 (MQ=255) aTACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGACGTTGTCGTCCCTTCCGCACcgta > 2:284551/1‑149 (MQ=255) gcctgcgcctgATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGACGTTGTCGTCACTTCCGCACTGTGGAAGc < 1:410672/150‑1 (MQ=255) gaAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGAc < 1:524023/109‑1 (MQ=255) gaAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGAc > 2:524023/1‑109 (MQ=255) aGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGACGTTGTCGTCACTTCCGCACTGTGGAAGCGAATCCTTGGCAAGaa < 1:136342/150‑1 (MQ=255) ccGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGt < 2:510945/48‑1 (MQ=255) ccGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGt > 1:510945/1‑48 (MQ=255) aTGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGACGTTGTCGTCACTTCCGCACTGTGGAAGCGAATCCTTGGCAAGAACTACTCGGCACGGGCCCTGGCGCTGGAACATCGCGTgg < 1:559327/150‑1 (MQ=255) cTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGcgtccacgtaggcatcgcccatgcgcgccttgaactcggttgcgtactcgcctttcatcaggcgcaggcggtatccccaggcttccaaggagtggg < 2:568238‑M2/150‑97 (MQ=255) tACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGACGTTGTCGTCACTTCCGCACTGTGGAAGCGAATCCTTGGCAAGAACTACTCGGCACGGGCCCTGGCGCTGGAACATCGCGTGGCCTgg < 2:508003/150‑1 (MQ=255) aCGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGACGTTGTCGTCACTTCCGCACTGTGGAAGCGAATCCTTGGCAAGAACTACTCGGCACGGGCCCTGGCGCTGGAACATCGCGTGGCCTGGc < 1:343807/150‑1 (MQ=255) ggACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGcgtccacgtaggcatcgcccatgcgcgccttgaactcggttgcgtactcgcctttcatcaggcgcaggcggtatccccaggcttccaaggagtgggagccga < 2:46756‑M2/150‑103 (MQ=255) ggACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGACGTTGTCGTCACTTCCGCACTGTGGAAGCGAATCCTTGGCAAGAACTACTCGGCACGGGCCCTGGCGCTGGAACATCGCGTGGCCTGGCTCAt > 2:150507/1‑150 (MQ=255) aCGcagtagtcgagcatctcttgcgagaactccagccactccatgccgtccacgtaggcatcgcccatgcgcgccttgaactcggttgcgtactcgcctttcatcaggcgcaggcggtatccccaggcttccaaggagtgggagccgaag > 2:185866‑M1/1‑3 (MQ=255) cGcagtagtcgagcatctcttgcgacaactccagccactccatgccgtccacgtaggcatcgcccatgcgcgccttgaactcggttgcgtactcgcctttcatcaggcgcaggcggtatccccaggcttccaaggagtgggagccgaaga < 2:62382‑M1/150‑149 (MQ=255) gcagtagtcgagcatctcttgcgagaactccagccactccatgccgtccacgtaggcatcgcccatgcgcgccttgaactcggttgcgtactcgcctttcatcaggcgcaggcggtatccccaggcttccaaggagtgggagccgaagag < 1:14560‑M1/150‑150 (MQ=255) | CCGACACCGGCCTCCTCAAGAAAGCAGTCCTCCCCGGCAAGCTCTTCGGCTCCCACTCCTTGGAAGCCTGGGGATACCGCCTGCGCCTGATGAAAGGCGAGTACGCAACCGAGTTCAAGGCGCGCATGGGCGATGCCTACGTGGACGGCATGGAGTGGCTGGAGTTCTCGCAAGAGATGCTCGACTACTGCGTCCAGGACGTTGTCGTCACTTCCGCACTGTGGAAGCGAATCCTTGGCAAGAACTACTCGGCACGGGCCCTGGCGCTGGAACATCGCGTGGCCTGGCTCATGGCC > NC_002947/2595503‑2595798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |