New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3541922 | 37 (1.600) | 5 (0.220) | 5/242 | NT | 12.5% | coding (844/966 nt) | galE | UDP‑glucose 4‑epimerase |
? | NC_002947 | = 3541938 | 34 (1.520) | coding (828/966 nt) | galE | UDP‑glucose 4‑epimerase |
TGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAG > NC_002947/3541781‑3542063 | tGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑Gt > 2:598971/1‑150 (MQ=255) aaCTCAGCACCCCCAGCGGTACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCATGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCtg > 2:346106/1‑150 (MQ=255) aGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGt > 1:574663/1‑150 (MQ=255) ccTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGCGCCGGCGAC‑CCGCCAcggctggtggcggatgc > 1:65430‑M2/1‑133 (MQ=255) tCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAggg < 2:574663/150‑1 (MQ=255) tCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAggg > 2:555787/1‑150 (MQ=255) cAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCa > 1:371324/1‑150 (MQ=255) gggATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCgg > 1:233161/1‑117 (MQ=255) gggATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCgg < 2:233161/117‑1 (MQ=255) aTACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGAt < 1:555787/150‑1 (MQ=255) tACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATc < 2:559988/150‑1 (MQ=255) tGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGt > 1:59015/1‑150 (MQ=255) cTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGccc < 2:59015/150‑1 (MQ=255) tCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGCGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTc < 2:70131/145‑1 (MQ=255) tCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTc > 1:70131/1‑145 (MQ=255) tCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCg > 2:204396/1‑150 (MQ=255) aCGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCgg > 1:158867/1‑94 (MQ=255) aCGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCgg < 2:158867/94‑1 (MQ=255) aTGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGc < 2:371324/150‑1 (MQ=255) ccGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGt > 1:222626/1‑150 (MQ=255) gCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTAt < 1:204396/150‑1 (MQ=255) cTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGcggctggtggcggatgcgagcaaggccatg < 1:425944‑M2/115‑31 (MQ=255) cTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGcggctggtggcggatgcgagcaaggccatg > 2:425944‑M2/1‑85 (MQ=255) cAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACctgctg > 1:50620/1‑150 (MQ=255) aGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCAACg > 1:62836/1‑150 (MQ=255) gAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGc < 2:508697/123‑1 (MQ=255) gAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGc > 1:508697/1‑123 (MQ=255) cacggCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCCGTCCCCCCCTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCa < 2:242204/147‑1 (MQ=255) cAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCa < 2:222626/150‑1 (MQ=255) aGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGACGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAg > 1:236723/1‑150 (MQ=255) cagcccagcACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGcgccggcgacccgccacggctggtggcggatgcgagcaag > 2:402212‑M1/1‑44 (MQ=255) cagcccagcACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGcgccggcgacccgccacggctggtggcggatgcgagcaag < 1:402212‑M1/84‑41 (MQ=255) cagcccagcACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTg > 2:492071/1‑150 (MQ=255) ccTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGa > 1:847/1‑150 (MQ=255) gCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAAcg > 1:34972/1‑150 (MQ=255) cATGGCCTTGCTCGCATCCGCCACCAGCCGcgccggcgacccgccacggctggtggcggatgcgagcaaggccatgcaggtgctgggctggcgccctgcattcgcctcactggag > 2:425944‑M1/1‑30 (MQ=255) cATGGCCTTGCTCGCATCCGCCACCAGCCGcgccggcgacccgccacggctggtggcggatgcgagcaaggccatgcaggtgctgggctggcgccctgcattcgcctcactggag < 1:425944‑M1/115‑86 (MQ=255) cATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAAcgc < 2:572418/150‑1 (MQ=255) cTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGcggctggtggcggatgcgagcaaggccatgcaggtgctgggctg < 1:402212‑M2/84‑45 (MQ=255) cTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGcggctggtggcggatgcgagcaaggccatgcaggtgctgggctg > 2:402212‑M2/1‑40 (MQ=255) gCATCCGCCACCAGCCGtggcgggtcgccggcgcggctggtggcggatgcgagcaaggccatgcaggtgctgggctggcgccctgcattcgcctcactggagcagattgtgcggcatgcgtggcagtgggagttgcagtatccctggagg > 1:65430‑M1/1‑17 (MQ=255) gCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGc < 2:462177/140‑1 (MQ=255) gCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGc > 1:462177/1‑140 (MQ=255) tCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGGCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCg > 1:144268/1‑150 (MQ=255) caccaGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAg > 1:460849/1‑150 (MQ=255) accaGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGtt < 2:153676/122‑1 (MQ=255) accaGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGtt > 1:153676/1‑122 (MQ=255) | TGAAAGCTATGAGGCCAACTCAGCGCCTCCAGGGATACTGCAACTCCCACTGCCACGCATGCCGCACAATCTGCTCCAGTGAGGCGAATGCAGGGCGCCAGCCCAGCACCTGCATGGCCTTGCTCGCATCCGCCACCAGCCGTGGCGG‑GTCGCCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAG > NC_002947/3541781‑3542063 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |