New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3679588 =	28 (1.210)	3 (0.140)	3/240	NT	12.0%	coding (305/714 nt)	mgtC	MgtC family magnesium transporter
	?	NC_002947	3679620 =	17 (0.770)					coding (273/714 nt)	mgtC	MgtC family magnesium transporter

TGGCCGGCACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGC  >  NC_002947/3679463‑3679722                                                                                                                              |                                                                                                                                       tGGCCGGCACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTgg                                                                                                                <  2:484053/150‑1 (MQ=255)      ggCACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCcgcg                                                                                                           >  2:353382/1‑150 (MQ=255)       gCACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTACACCACAAGGTGGCCGCgg                                                                                                          >  1:456258/1‑150 (MQ=255)         accacGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGgtg                                                                                                        <  2:288486/150‑1 (MQ=255)            acNTCCTGACGGTCCAGGCGCTGGGCGNTATCACGCAACANGATGTTNGNGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCcgcagatcgg                                                                                                     >  1:436510/1‑143 (MQ=255)             caggcatggcgcctgccgatgcgtcgcgggtcgcagcctatgtggtgtcgggcatcggctttctcggcggtggcgtcatcatgcgcgatggtttcaatgtangtggcctgaacACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCa                                                                                                    >  1:330369‑M1/114‑150 (MQ=255)             cGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCa                                                                                                    <  1:353382/150‑1 (MQ=255)              gTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAg                                                                                                   <  2:538733/150‑1 (MQ=255)                            ccgatgcgtcgcgggtcgcagcctatgtggtgtcgggcatcggctttctcggcggtggcgtcatcatgcgcgatggtttcaatgtacgtggcctgaacACCGCAGCCGTGCACCACAAGGTGGCCGCGgtg                                                                                                        <  2:160767‑M1/33‑1 (MQ=255)                            ccgatgcgtcgcgggtcgcagcctatgtggtgtcgggcatcggctttctcggcggtggcgtcatcatgcgcgatggtttcaatgtacgtggcctgaacACCGCAGCCGTGCACCACAAGGTGGCCGCGgtg                                                                                                        >  1:160767‑M1/99‑131 (MQ=255)                                   ggCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACaa                                                                                                                     >  2:155804/1‑111 (MQ=255)                                   ggCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACaa                                                                                                                     <  1:155804/111‑1 (MQ=255)                                            aCGCAACAGGATGTTGACGCAGAGCACCACCAGGCTACCAAGTGCCGCCTCCATCATCAGCCCAAGACTGCACAGCACGCCGCCCGCAGCCGTGCACCACAAGGTGTCCGCCGTGTTCAGTCCACGTACATTAAAACCATCGCACatgat                                                                     >  2:237559/1‑150 (MQ=255)                                              gCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCAtgatga                                                                   >  1:561965/1‑150 (MQ=255)                                                     gATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCcgcg                                                                                                           >  1:259092/1‑103 (MQ=255)                                                     gATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCcgcg                                                                                                           <  2:259092/103‑1 (MQ=255)                                                            gcgcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGgt                                                                                                         >  1:14237/1‑98 (MQ=255)                                                            gcgcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGgt                                                                                                         <  2:14237/98‑1 (MQ=255)                                                            gcgcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCAtgatga                                                                   <  2:374299/136‑1 (MQ=255)                                                            gcgcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCAtgatga                                                                   >  1:374299/1‑136 (MQ=255)                                                              gcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGaaa                                                   >  1:399116/1‑150 (MQ=255)                                                              gcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATCACGCCACCGCCGAGaaa                                                   <  2:316642/150‑1 (MQ=255)                                                                       caccaGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGcc                                          >  1:525549/1‑150 (MQ=255)                                                                          caGGCTACCCCGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACACGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGa                                       >  1:549712/1‑150 (MQ=255)                                                                          caGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACCGCACGACGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGAc                                                                  <  1:383114/123‑1 (MQ=255)                                                                          caGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGAc                                                                  >  2:383114/1‑123 (MQ=255)                                                                                aCCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGAcaccac                                 <  2:308571/150‑1 (MQ=255)                                                                                         cgccTCCATTATAAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCAGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGCCGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGc                        <  1:237559/150‑1 (MQ=255)                                                                                                          cAAGGTTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCgg       <  2:54106/150‑1 (MQ=255)                                                                                                           aaGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATAGGc      >  1:258366/1‑150 (MQ=255)                                                                                                               cTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGgc  >  1:101258/1‑150 (MQ=255)                                                                                                                              |                                                                                                                                       TGGCCGGCACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGC  >  NC_002947/3679463‑3679722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.