New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5257399	27 (1.170)	3 (0.140)	3/234	NT	11.7%	coding (451/909 nt)	PP_4634	alpha/beta family hydrolase
	?	NC_002947	= 5257429	20 (0.920)					coding (421/909 nt)	PP_4634	alpha/beta family hydrolase

GCGTGGTCCAGTCGTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCGGCTGACCTGGAAAATGCGCTGCCG  >  NC_002947/5257261‑5257542                                                                                                                                           |                                                                                                                                                gcgTGGTCCAGTCGTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAgc                                                                                                                                      >  1:133735/1‑150 (MQ=255)   gTGGTCCAGTCGTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAccgc                                                                                                                                    <  2:57764/150‑1 (MQ=255)      gTCCAGTCGTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAg                                                                                                                                 <  1:425304/150‑1 (MQ=255)         cAGTCGTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAg                                                                                                                              >  2:242651/1‑150 (MQ=255)              gTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGaa                                                                                                                         >  2:273771/1‑150 (MQ=255)              gTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGaa                                                                                                                         <  1:242651/150‑1 (MQ=255)              gTGCAACACGACAGATGGGGTATCTTACAGCTACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACTTGCCACTTGCCGAACAGCTGCCCGCGCTGGGTGGCCGCATAGTAGCGCCAGTAGGCGaa                                                                                                                         >  2:195172/1‑150 (MQ=255)                      cGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGc                                                                                                                            >  2:60000/1‑139 (MQ=255)                      cGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGc                                                                                                                            <  1:60000/139‑1 (MQ=255)                           gATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGACGAACAGCTTCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCgccaacc                                                                                                            <  2:391408‑M2/150‑8 (MQ=255)                            ctgacgtctCTGCCAGCCACCCCGGGGGCTGTCCGTGAAAATAGCCGAATACCCCGGTCAGCAGCGGCATGACCACATGCCACGTGCCGAACAGCTGCCATCGCTGGTTGGCgcgcagttcgcctactggcgctactatgcggccaacca                                                                                                           <  2:86190‑M1/146‑39 (MQ=255)                               gCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCgcgcagttcgcctactggcgctactatgcggccaaccagag                                                                                                        >  1:86190‑M1/1‑109 (MQ=255)                                cGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCAc                                                                                                       >  2:143362/1‑150 (MQ=255)                                 gaggcttccAGCAACCCCCGGGGCTGGCCCGGAAAATAGCCGGATAACCGGGTCAGCAGCGGCATGCCCACATGCCACCTGCCTAACAGCTGCCAGCGCTGGTTGGCgcgcagttcgcctaattgcgctactatgcggcaaaccagcgct                                                                                                      <  2:47956‑M1/146‑44 (MQ=255)                                      ttCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGAc                                                                                                    <  2:408597/147‑1 (MQ=255)                                      ttCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGAc                                                                                                    >  1:408597/1‑147 (MQ=255)                                             cACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACAAGATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATc                                                                                          <  1:6551/150‑1 (MQ=255)                                              aCCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCt                                                                                         <  1:143362/150‑1 (MQ=255)                                                             cGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGAccc                                                                                                  <  1:403786/126‑1 (MQ=255)                                                             cGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGAccc                                                                                                  >  2:403786/1‑126 (MQ=255)                                                             cGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTg                                                                          <  1:457317/150‑1 (MQ=255)                                                             cGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTg                                                                          >  1:253475/1‑150 (MQ=255)                                                                  aaaTGGCCGAATCGCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAgg                                                                     <  2:436734/150‑1 (MQ=255)                                                                        ccGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGt                                                                           <  1:345737/138‑1 (MQ=255)                                                                        ccGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGt                                                                           >  2:345737/1‑138 (MQ=255)                                                                        ccGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACt                                                               <  2:253475/150‑1 (MQ=255)                                                                                           gcGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACtgt                                            <  2:542165/150‑1 (MQ=255)                                                                                           gcGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGGGCCAGGCCTACTGCACAACCGCCGAAACtgt                                            <  1:273771/150‑1 (MQ=255)                                                                                                              cTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCgg                         >  1:202789/1‑150 (MQ=255)                                                                                                                               aGCGCTGGTTTGCCGCATAGTAGCGCAATTAGGCGAACTGCGCgccaaccagcgctggcagctgttaggcaggtggcatgtgggcatgccgctgctgacccggttatccggctattttccgggccagccccgggggttgctggaagcctc        <  2:47956‑M2/150‑108 (MQ=255)                                                                                                                                gcgcTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCAAGTCCACCGGCTGACCTGGAAAATgcgc       <  1:391408/150‑1 (MQ=255)                                                                                                                                 ctctgGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCgccaaccagcgctggcagctgttcggcaagtggcatgtggtcatgccgctgctgacccgggtattcggctattttcccggcaagcgcctggggtggctggaagacacgc      >  1:86190‑M2/3‑41 (MQ=255)                                                                                                                                    tGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCgccaaccagcgatggcagctgttcggcacgtggcatgtggtcatgccgctgctgaccggggtattcggctattttcacggacagcccccggggtggctggcagagacgtcag   <  2:86190‑M2/150‑113 (MQ=255)                                                                                                                                    tGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCGGCTGACCTGGAAAATGCGCTGcc   >  1:337088/1‑150 (MQ=255)                                                                                                                                     ggTTGGCgcgcagttcgcctactggcgctactatgcggccaaccagcgctggaagctgttcgtcaagtggcatgtggtcatgccgctgctgacccgggtattcggctattttcccggcaagcgcctggggtggctggaagacacgccatc  <  2:391408‑M1/150‑144 (MQ=255)                                                                                                                                           |                                                                                                                                                GCGTGGTCCAGTCGTGCACCACGCCGGATGGCGTGTCTTCCAGCCACCCCAGGCGCTTGCCGGGAAAATAGCCGAATACCCGGGTCAGCAGCGGCATGACCACATGCCACTTGCCGAACAGCTGCCAGCGCTGGTTGGCCGCATAGTAGCGCCAGTAGGCGAACTGCGCGCCAACCATCACGACCCGACGGATCTGGCCAGCCGATGGTGCCAGGCCTACTGCACAACCGCCGAAACTGTGCCCCACCACGTCCACCGGCTGACCTGGAAAATGCGCTGCCG  >  NC_002947/5257261‑5257542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.