| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5669477 | 20 (0.870) | 3 (0.150) | 3/222 | NT | 12.8% | intergenic (+27/‑98) | ahcY/metF | adenosylhomocysteinase/5,10‑methylenetetrahydrofolate reductase |
| ? | NC_002947 | = 5669498 | 23 (1.120) | intergenic (+48/‑77) | ahcY/metF | adenosylhomocysteinase/5,10‑methylenetetrahydrofolate reductase | |||||
AGTGGCCCTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAG > NC_002947/5669330‑5669626 | agTGGCCCTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTggcagg < 1:450025/150‑1 (MQ=255) gCCCTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCaaa < 1:542391/150‑1 (MQ=255) ccTGGAAATGGTCCCGGGCTTCGGCGGCGTGGTTTCCCAGCTGAACAAGCAGCAACCCGACTACATCGGTGTGACCGTCGAAGGCCCGTTCAAGCCCCCCGCTTGCCGCTACTATGCGGCAACCTTGAAGCTGCAAGTGGCAGGCAAAgg < 2:74589/150‑1 (MQ=255) tGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCa > 1:85203/1‑150 (MQ=255) gTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGc > 1:550127/1‑150 (MQ=255) gcgGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTt < 1:504325‑M2/150‑2 (MQ=255) ttCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTtgccac < 2:556522‑M2/150‑7 (MQ=255) cgcggcgtGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTtgccacttg > 1:15223‑M2/2‑141 (MQ=255) ggcgTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAacggcacggtatgcctttgcctgccacttgcag < 1:76576‑M1/150‑34 (MQ=255) ccAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAaca > 2:333063/1‑150 (MQ=255) cAAGCAGCACGCCGACTACGTCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTg > 2:488000/1‑150 (MQ=255) agcagcAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGaa < 1:204268/150‑1 (MQ=255) aaGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAacggcacggtatgcctttgcctgccactt > 1:360102‑M1/1‑89 (MQ=255) aaGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAacggcacggtatgcctttgcctgccactt < 2:360102‑M1/118‑30 (MQ=255) cGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCaa < 2:504325/150‑1 (MQ=255) aCTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGc < 2:418790/150‑1 (MQ=255) tCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGa > 2:77960/1‑150 (MQ=255) ggCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTgg < 1:77960/150‑1 (MQ=255) gCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGc > 1:298485/1‑150 (MQ=255) ttCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTa < 1:521505/150‑1 (MQ=255) aaGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACtt > 1:179241/1‑150 (MQ=255) aaGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACtt > 2:415340/1‑150 (MQ=255) gCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCa < 1:393091/137‑1 (MQ=255) gCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCa > 2:393091/1‑137 (MQ=255) ctactaAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGAc < 2:550127/150‑1 (MQ=255) ggCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGc < 2:92405/150‑1 (MQ=255) cTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTtgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgctgcttggtcagctgggtgaccacgcc < 1:76576‑M2/150‑118 (MQ=255) gCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGa < 2:179241/150‑1 (MQ=255) cAAGTGGCAacggcacggtatgcctttgcctgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgctgcttggtcagctgggtgaccacgccgcg > 1:15223‑M1/1‑9 (MQ=255) aaGTGGCAGGCAAAGGCATACCGTGCCGTtgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggctt < 2:360102‑M2/118‑90 (MQ=255) aaGTGGCAGGCAAAGGCATACCGTGCCGTtgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggctt > 1:360102‑M2/1‑29 (MQ=255) gTGGCAacggcacggtatgcctttgcctgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgctgcttggtcagctgggtgaccacgccgccgaa < 2:556522‑M1/150‑145 (MQ=255) gcaggcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTcaca > 1:129199/1‑150 (MQ=255) aggcaAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAg > 2:322167/1‑150 (MQ=255) aacggcacggtatgcctttgcctgccacttgcagcttcaagcttgccgcttagtagcggtaggcgtgcggcttgaacgggccttcgacggtcacgccgatgtagtcggcttgctgcttggtcagctgggtgaccacgccgccgaagccgc < 1:504325‑M1/150‑150 (MQ=255) | AGTGGCCCTGGAAATGGTCCGCGGCTTCGGCGGCGTGGTCACCCAGCTGACCAAGCAGCAAGCCGACTACATCGGCGTGACCGTCGAAGGCCCGTTCAAGCCGCACGCCTACCGCTACTAAGCGGCAAGCTTGAAGCTGCAAGTGGCAGGCAAAGGCATACCGTGCCGTTGCCACTTGCAGCTCCGGAAACACAGATCTTGAACGACGCCCAAGCCAGACCGGCCATCACCGATCTGGCTTTTACTTGCAGCTTGCCGCCAGACGCTTGTTGCCAGAGGAACGCCTGATGTCACAAG > NC_002947/5669330‑5669626 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |