| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 176399 | NA (NA) | 17 (0.770) +CGAAA |
10/240 | NT | 55.8% | intergenic (+43/‑420) | PP_5SA/PP_16SB | 5S ribosomal RNA/16S ribosomal RNA |
| ? | NC_002947 | = 182013 | 14 (0.610) | intergenic (+2/+63) | PP_5SB/PP_0160 | 5S ribosomal RNA/ferrioxamine receptor | |||||
CCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGTTGACAGTGTTTTTGAATGCTGTATTATTCACCTCCCGCGACGAGAGATCGAAGCGAGTTAAGTGTCTGAAGT > NC_002947/176263‑176540 | ccaccTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGaa > 2:374989/1‑150 (MQ=34) caccTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAg < 2:177174/150‑1 (MQ=35) catcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTc > 1:523859/1‑150 (MQ=255) gAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAg < 1:63367/150‑1 (MQ=255) aaCGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGt < 2:523859/150‑1 (MQ=255) gCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGc < 1:337189/150‑1 (MQ=255) tgtgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAggt > 1:35093/1‑150 (MQ=255) ggggggTTTCCCCACGTAACAGTACGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAggtg < 2:144008/148‑1 (MQ=255) ccATGTGAGAGTAGGTCATCGTAAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGTTGACAgtgt > 2:441537/1‑150 (MQ=255) gagaGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGtt < 1:219297/136‑1 (MQ=255) gagaGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGtt > 2:219297/1‑136 (MQ=255) gTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGTTGACAGTGTTTTTGAATGc < 2:35093/150‑1 (MQ=255) cAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTaa < 2:610739/57‑1 (MQ=33) cAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTaa > 1:610739/1‑57 (MQ=33) aGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGTTGACAGTGTTTTTGAATGCTg > 1:55730/1‑138 (MQ=255) aGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGTTGACAGTGTTTTTGAATGCTg < 2:55730/138‑1 (MQ=255) taaagacAAAACCCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTAGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGTTGACAGTGTTTTTGAATGCTGTAATATTCACATCCcgcg > 2:131955/7‑150 (MQ=37) agacAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGtt < 2:227349/89‑1 (MQ=255) agacAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGtt > 1:227349/4‑92 (MQ=255) aaaCCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGTTGACAGTGTTTTTGAATGCTGTATTATTCACCTCCCGCGACgagaga > 1:111016/1‑150 (MQ=255) aGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCa > 2:294979/1‑60 (MQ=255) aGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCa < 1:294979/60‑1 (MQ=255) tAGGTGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGTTGACAGTGTTTTTGAATGCTGTATTATTCACCTCCCGCGACGAGAGATCGAAGCGAGTTAAGTGTCTGaa < 2:111016/150‑1 (MQ=255) ggggTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAg < 2:291092/73‑1 (MQ=255) ggggTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAg > 1:291092/1‑73 (MQ=255) ggggTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGTTGACAGTGTTTTTGAATGCTGTATTATTCACCTCCCGCGACGAGAGATCGAAGCGAGTTAAGTGTCTGAAGt < 1:441537/150‑1 (MQ=255) | CCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCATTTCGCAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTAAGTAGAAGCTCATGCTTCGTCCTGGTAAGCCGCAAGGTCAGCCAGTTGCAGTAAAAAGGTGGTTGACAGTGTTTTTGAATGCTGTATTATTCACCTCCCGCGACGAGAGATCGAAGCGAGTTAAGTGTCTGAAGT > NC_002947/176263‑176540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |