New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1025270 =	14 (0.610)	3 (0.170)	3/196	NT	20.0%	intergenic (‑121/+108)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	1025363 =	13 (0.720)					intergenic (‑214/+15)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein

TACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGC  >  NC_002947/1025141‑1025411                                                                                                                                  |                                                                                                                                              ccgattacgccggtggcgcattccatcgtgagccagccgcttagcgtcaaggtttcccagttcaaggtcagcccgtttgggcgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTcgcgggcttgccc                                                                                                                           >  2:588789‑M1/130‑144 (MQ=255)   cTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCCGCGCACATGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGc                                                                                                                         <  1:500352/150‑1 (MQ=255)           gTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAg                                                                                                                 <  2:134288/150‑1 (MQ=255)                  cTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGgc                                                                                                          <  2:136988/150‑1 (MQ=255)                                 ccagccgcttagcgtcaaggtttcccagttcaaggtcagcccgtttgggcgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccg                                                                                                                                               <  2:326316‑M1/1‑1 (MQ=255)                                 ccagccgcttagcgtcaaggtttcccagttcaaggtcagcccgtttgggcgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccg                                                                                                                                               >  1:326316‑M1/98‑98 (MQ=255)                                   ttATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGt                                                                                         <  2:488246/150‑1 (MQ=255)                                          cggccTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATc                                                                                  >  2:126718/1‑150 (MQ=255)                                               ttGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCtgtg                                                                             <  1:22708/150‑1 (MQ=255)                                                        cccagttcaaggtcagcccgtttgggcgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGc                                                                    >  1:342390‑M1/75‑150 (MQ=255)                                                                                  cgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTcgc                                                                                                                                     <  1:35759‑M1/11‑1 (MQ=255)                                                                                  cgcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTcgc                                                                                                                                     >  2:35759‑M1/49‑59 (MQ=255)                                                                                   gcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCTGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAaga                                                       >  2:521152‑M1/48‑136 (MQ=255)                                                                                   gcaatgatttttccggtgtgagtgttgattaagcgttagccagtaccGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCTGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAaga                                                       <  1:521152‑M1/89‑1 (MQ=255)                                                                                      cgcgGGCTCGCCGCGGAGAATCGGCGCGTTGTGTGGCCCGTGCTGGCCTCTTCGCACGCAACGCCGCGCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCCAGATCCTGGGGGACCGGCCTCGCCCGCGAAGAGGCCGGTACTGGCTAAc                                      <  2:379612/150‑1 (MQ=255)                                                                                       gcgGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGCTAGGGAGCAGCGTCTGAACCTGGCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACg                                     >  1:294149/1‑150 (MQ=38)                                                                                                ccGGGCAGGATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAAACTGTCGAGATCCTGTGGGCGAGGGCTTACCGGCGAAGAGGCCGGTACTGGCTAACGCTTAATCaa                            >  1:560458/1‑150 (MQ=39)                                                                                                   ggCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAacac                         <  1:193744/150‑1 (MQ=255)                                                                                                            ggggCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGAACTGGCTAACGCTTAATCAACACTCACACCgg                >  1:380276/1‑150 (MQ=255)                                                                                                                          gCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCt                                                                                                                    <  2:294633/36‑1 (MQ=255)                                                                                                                          gCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCt                                                                                                                    >  1:294633/1‑36 (MQ=255)                                                                                                                          gCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTgcgc  >  1:202621/1‑150 (MQ=255)                                                                                                                                  |                                                                                                                                              TACTTTCAAGGTTAAAGCTCCCTTTCTTTTCTAGTTATGGCCGGCCTTGTGGGCCGGGTGATTGCTGCGGTGTTGCCAGGGGTGCCGCGGGATCGCCGGGCAGAATCGGGGCGTTGTGTTGGCCGTTCTGGCCTCTTCGCGGGCAAGCCCGCTCCCTCAGGTAGGGCGCAGTGTCCGAACCTGTCGAGATCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGC  >  NC_002947/1025141‑1025411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.