New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1332227 =	NA (NA)	4 (0.180)	3/240	NT	NA	coding (1446/1644 nt)	PP_1157	acetolactate synthase
	?	NC_002947	1332256 =	NA (NA)					coding (1475/1644 nt)	PP_1157	acetolactate synthase
Rejected: Coverage evenness skew score above cutoff.

GGCTTCATGATGAACAGCCAGGAACTGGAAACTGCAGTACGTCTGGGCATGCACATCACCGTGGTGATCCTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAGCGCCGAAGGCCTGCTGCCGCTGCTGGAGCACTGCATCAAGACCCCAGGTGT  >  NC_002947/1332084‑1332340                                                                                                                                                |                                                                                                                  ggcTTCATGATGAACAGCCAGGAACTGGAAACTGCAGTACGTCTGGGCATGCACATCACCGTGGTGATCCTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAAc                                                                                                             >  2:376160/1‑150 (MQ=32)       atgatgAACAGCCAGGAACTGGAAACTGCAGTACGTCTGGGCATGCACATCACCGTGGTGATCCTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGAc                                                                                                       >  1:288783/1‑150 (MQ=32)               cAGCCAGGAACTGGAAACTGCAGTACGTCTGGGCATGCACATCACCGTGGTGATCCTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCaa                                                                                               <  1:461819/150‑1 (MQ=32)                     ggAACTGGAAACTGCAGTACGTCTGGGCATGCACATCACCGTGGTGATCCTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGc                                                                                         >  2:578312/1‑150 (MQ=32)                                         gTCTGGGCATGCACATCACCGTGGTGATCCTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACg                                                                     <  2:53565/150‑1 (MQ=32)                                            tGGGCATGCACATCACCGTGGTGATCCTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGcc                                                                  >  2:245088/1‑150 (MQ=32)                                                 aTGCACATCACCGTGGTGATCCTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACcgc                                                             >  1:413345/1‑150 (MQ=32)                                                            cGTGGTGATCCTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAgcgc                                                  <  1:24553/150‑1 (MQ=32)                                                                 tgATCCTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAGCGCCGAAg                                             <  1:120843/150‑1 (MQ=32)                                                                     ccTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACg                                                                     >  1:337349/1‑122 (MQ=32)                                                                     ccTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACg                                                                     <  2:337349/122‑1 (MQ=33)                                                                          gTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAGCGCCGAAGGCCtgctgc                                    <  1:525218/150‑1 (MQ=32)                                                                                  ggCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAGCGCCGAAGGCCTGCTGCCGctgctg                            >  1:271326/1‑150 (MQ=32)                                                                                         gCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAACTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAGCGCCGAAGGCCTGCTGCCGCTGCTGGAGCACt                     >  1:239301/1‑150 (MQ=17)                                                                                            tGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAGCGCCGAAGGCCTGCTGCCGCTGCTGGAGCACTGCa                  <  1:245088/150‑1 (MQ=32)                                                                                                    tGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAGCGCCGAAGGCCTGCTGCCGCTGCTGGAGCACTGCATCAAGAcc          >  1:521849/1‑150 (MQ=32)                                                                                                     ggAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAGCGCCGAAGGCCTGCTGCCGCTGCTGGAGCACTGCATCAAGAccc         <  2:288783/150‑1 (MQ=32)                                                                                                        aGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAGCGCCGAAGGCCTGCTGCCGCTGCTGGAGCACTGCATCAAGACCCCAg      <  2:317015/150‑1 (MQ=32)                                                                                                            ggCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAGCGCCGAAGGCCTGCTGCCGCTGCTGGAGCACTGCATCAAGACCCCAGgtgt  <  1:376160/150‑1 (MQ=32)                                                                                                                                                |                                                                                                                  GGCTTCATGATGAACAGCCAGGAACTGGAAACTGCAGTACGTCTGGGCATGCACATCACCGTGGTGATCCTGCGTGACGACGGCTACGGCATGATCCGCTGGAAGCAGGCCAACATGGGTTTCACCGATTTCGGCCTGGACTACGGCAACCCGGACTTCGTCAAGTATGCCGAAGCCTACGGCGCCAACGGCCACCGCGTGGAAAGCGCCGAAGGCCTGCTGCCGCTGCTGGAGCACTGCATCAAGACCCCAGGTGT  >  NC_002947/1332084‑1332340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.