| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4772452 = | 27 (1.170) | 3 (0.140) | 3/236 | NT | 12.4% | coding (6860/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4772493 = | 17 (0.780) | coding (6819/10413 nt) | pvdD | non‑ribosomal peptide synthetase | |||||
CAACTGCGACGTACTCCAGCCATCGAGCAAGATATGGTGGTAGGTCCAGATCAGTTGATGGCGCTGATCGTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAATACGTCGTGGCGCGCCACCA > NC_002947/4772346‑4772638 | gcaagacctggatgagccattgcagtacgtgatggggcagttgccactgccattgcgtgagctggactggcgcggtcgtggcgattgcgcgcaggcgctggaggcaCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGc > 2:578999‑M1/107‑150 (MQ=255) gACGTACTCCAGCCATCGAGCAAGATATGGTGGTAGGTCCAGATCAGTTGATGGCGCTGATCGTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAgc < 1:7503/150‑1 (MQ=255) cTCCAGCCATCGAGCAAGATATGGTGGTAGGTCCAGATCAGTTGATGGCGCTGATCGTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTACCCACTGCCTCCAGCGCCTgc > 2:573723/1‑150 (MQ=255) aTCGAGCAAGATATGGTGGTAGGTCCAGATCAGTTGATGGCGCTGATCTTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGACGCCTCGGTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATc < 1:573723/150‑1 (MQ=255) aTCGAGCAAGATATGGTGGTAGGTCCAGATCAGTTGATGGCGCTGATCGTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTgcgcacactc < 1:614543/150‑7 (MQ=255) aTCGAGCAAGATATGGTGGTAGGTCCAGATCAGTTGATGGCGCTGATCGTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATc > 2:598295/1‑150 (MQ=255) gAGCAAGATATGGTGGTAGGTCCAGATCAGTTGATGGCGCTGATCGTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGcc < 2:490055/150‑1 (MQ=255) tggtggTAGGTCCAGATCAGTTGATGGCGCTGATCGTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCgcgc < 1:598295/150‑1 (MQ=255) ggtAGGTCCAGATCAGTTGATGGCGCTGATCGTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGt > 1:26013/1‑150 (MQ=255) cAGATCAGTTGATGGCGCTGATCGTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCGGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCa > 1:573478/1‑150 (MQ=255) tCGTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGc < 2:96283/150‑1 (MQ=255) aCCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAAc < 1:259324/135‑1 (MQ=255) aCCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAAc > 2:259324/1‑135 (MQ=255) cagcaTGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCaa > 1:108947/1‑150 (MQ=255) gcgcatgcTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATg > 2:522933/7‑150 (MQ=255) ggcggcCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGCCCTGCACTGGCTCATCCAGGTCt < 2:26013/150‑1 (MQ=255) gcactggccaacgaagagcgtgaacgcggcttcgacctggccagTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGc > 2:578999‑M2/45‑150 (MQ=255) ccaacgaagagcgtgaacgcggcttcgacctggccagTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTAc < 1:182070‑M2/82‑1 (MQ=255) ccaacgaagagcgtgaacgcggcttcgacctggccagTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTAc > 2:182070‑M2/38‑119 (MQ=255) CCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGa > 2:108947‑M1/1‑150 (MQ=255) gAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCa < 2:345397/74‑1 (MQ=255) gAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCa > 1:345397/1‑74 (MQ=255) ttGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAATACGTCGTGGCGCGcc > 1:230828/1‑150 (MQ=255) ggccagTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAATACGTCGTGGCGCGccac < 1:395500‑M2/144‑1 (MQ=255) ccagTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAATACGTCGTGGCGCGccacca > 2:350947‑M2/5‑150 (MQ=255) cagTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAAc > 2:279431‑M2/4‑70 (MQ=255) cagTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAAc < 1:279431‑M2/67‑1 (MQ=255) | CAACTGCGACGTACTCCAGCCATCGAGCAAGATATGGTGGTAGGTCCAGATCAGTTGATGGCGCTGATCGTCCAGGCGCACCAGCAGCATGCGCTGCAGCGGCGGCCTGGCCAGGTCGAAGCCGCGTTCACGCTCTTCGTTGGCCAGTGCCTCCAGCGCCTGCGCGCAATCGCCACGACCGCGCCAGTCCAGCTCACGCAATGGCAGTGGCAACTGCCCCATCACGTACTGCAATGGCTCATCCAGGTCTTGCCAAAGGAAGCCGGTGCGCAATACGTCGTGGCGCGCCACCA > NC_002947/4772346‑4772638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |