New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5228684	15 (0.650)	4 (0.180)	4/244	NT	21.8%	coding (423/2391 nt)	PP_4606	ferric siderophore receptor
	?	NC_002947	= 5228712	14 (0.620)					coding (395/2391 nt)	PP_4606	ferric siderophore receptor

GTTGCCCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGAGGTCACGGTGGTGGCCTGCAGGCTGAGGGCTCCGGAGGTGTCTGCTGGTTCGAGGGTCAGGGTACGTGCGTCGACGCGGCGCCAGGCCAGCCCAGCGTTGCCCAGCAGTTGTTGCA  >  NC_002947/5228564‑5228859                                                                                                                                                     |                                                                                                                                                    gTTGCCCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGCGCCTTGGCCGCGCATGATCGAAGCGCTGGCCGg                                                                                                                                                    <  1:526219‑M2/150‑2 (MQ=255)       gtGGGTAATGCGACTGACGTTGGCTAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGAGCTGGGCCGGTACCAGGTTGATTGCCTGGGGGAGTTGGTGGTTCGGGCCCTGGCTGGGGATGATCGAAGCGCTTGCCGGGGGCTg                                                                                                                                              <  2:39400/149‑1 (MQ=255)              aTGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTg                                                                                                                                       <  1:196019/150‑1 (MQ=255)                               tccgatctcatcGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGTGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGa                                                                                                                      <  1:286460/143‑1 (MQ=255)                                                          cTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGg                                                                                                                                                    >  2:485886‑M2/1‑92 (MQ=255)                                                          cTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGg                                                                                                                                                    <  1:485886‑M2/93‑2 (MQ=255)                                                              tCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAgtcgtc                                                                                                                               <  1:119653/110‑1 (MQ=255)                                                              tCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAgtcgtc                                                                                                                               >  2:119653/1‑110 (MQ=255)                                                                      gACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGAGGTCACGGTGGTGGCCTGCAGGCTGAGGGCTCCGGAGgt                                                                               <  1:369440/150‑1 (MQ=255)                                                                         cTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAgt                                                                                                                                   >  1:425438/1‑95 (MQ=255)                                                                         cTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAgt                                                                                                                                   <  2:425438/95‑1 (MQ=255)                                                                                     cACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGAGGTCACGGTGGTGGCCTGCAGGCTGAGGGCTCCGGAGGTGTCTGCTGGTTCGAg                                                                <  1:329030/150‑1 (MQ=255)                                                                                                             cTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGAGGTCACGGTGGTGGCCTGCAGACTGAGGGCTCCGCGGGTGTCTGCCGGTTCGAGGGTCAGGGTACGTGCGTCGAcgcg                                        >  2:37869/1‑150 (MQ=255)                                                                                                                gTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGAGGTCACGGTGGTGGCCTGCAGGCTGAGGGCTCCGGAGGTGTctgctg                                                                       >  2:62862/1‑116 (MQ=255)                                                                                                                gTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGAGGTCACGGTGGTGGCCTGCAGGCTGAGGGCTCCGGAGGTGTctgctg                                                                       <  1:62862/116‑1 (MQ=255)                                                                                                                 ttCGGGCCCTGGCCGCGCATGATCGAAGCACTGGCCGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGAGGTCACGGTGGTGGCCTGCAGGCTGAGGGCTCCGGAGGTGTCTGCTGGTTCGAGGGTCAGGGTACGTGCGTCGACgcggcgg                                    >  1:370663/1‑149 (MQ=255)                                                                                                                      gCCCTGGCCGCGCATGATCGAAGCGCTGGCCGgggcccgaaccaggacatcccccaggcaatcaacgtggtaccggcccaggtcatccgcgaccaggccccgcgcaacctcgatgatgccctg                                                          <  2:254907‑M2/123‑92 (MQ=255)                                                                                                                      gCCCTGGCCGCGCATGATCGAAGCGCTGGCCGgggcccgaaccaggacatcccccaggcaatcaacgtggtaccggcccaggtcatccgcgaccaggccccgcgcaacctcgatgatgccctg                                                          >  1:254907‑M2/1‑32 (MQ=255)                                                                                                                          tGGCCGCGCATGATCGAAGCGCTGGCCGgggcccgaaccaggacatcccccaggcaatcaacgtggtaccggcccaggtcatccgcgaccaggccccgc                                                                              >  2:327650‑M2/1‑28 (MQ=255)                                                                                                                          tGGCCGCGCATGATCGAAGCGCTGGCCGgggcccgaaccaggacatcccccaggcaatcaacgtggtaccggcccaggtcatccgcgaccaggccccgc                                                                              <  1:327650‑M2/99‑72 (MQ=255)                                                                                                                                    tGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGAGGTCACGGTGGTGGCCTGCAGGCTGAGGGCTCCGGa                                                                                  <  1:457764/85‑1 (MQ=255)                                                                                                                                    tGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGAGGTCACGGTGGTGGCCTGCAGGCTGAGGGCTCCGGa                                                                                  >  2:457764/1‑85 (MQ=255)                                                                                                                                                   ccGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGAGGTCACGGTGGTGGCCTGCAGGCTGAGGGCTCCGGAGGTGTCTGCTGGCTAGAGGGTCAGGGTCCGTGCGCCGACGCCGCGCCAGGTCAGCCCCGCGTTGCCCAGCAGTTGTTGCa  >  2:499578/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GTTGCCCTGGGTAATGCCACTGACGTTGGCCAGGGCATCATCGAGGTTGCGCGGGGCCTGGTCGCGGATGACCTGGGCCGGTACCACGTTGATTGCCTGGGGGATGTCCTGGTTCGGGCCCTGGCCGCGCATGATCGAAGCGCTGGCCGGGGGCTGGTAGCTGTAGTCGTCCAGTTGCGAGGTCACGGTGGTGGCCTGCAGGCTGAGGGCTCCGGAGGTGTCTGCTGGTTCGAGGGTCAGGGTACGTGCGTCGACGCGGCGCCAGGCCAGCCCAGCGTTGCCCAGCAGTTGTTGCA  >  NC_002947/5228564‑5228859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.