New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5725015 | 22 (0.950) | 4 (0.180) | 4/242 | NT | 15.0% | coding (2007/2574 nt) | opgH | glucans biosynthesis glucosyltransferase H |
? | NC_002947 | = 5725039 | 24 (1.070) | coding (1983/2574 nt) | opgH | glucans biosynthesis glucosyltransferase H |
GCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCAGCAACATGGA > NC_002947/5724907‑5725176 | gCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTc < 2:75214/150‑1 (MQ=255) gCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTc < 2:406071/150‑1 (MQ=255) cGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGa > 1:164583/1‑150 (MQ=255) cGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGa < 2:364834/150‑1 (MQ=255) cGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGAGGGCCATGCCGGTGAACCGCTTCGCCCCACGGCGTGGa < 2:320837/150‑1 (MQ=255) gATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAg < 1:40132/150‑1 (MQ=255) ggATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCCCGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTc < 2:23240/127‑1 (MQ=255) ggATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTc > 1:23240/1‑127 (MQ=255) cAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGa > 1:33826/1‑150 (MQ=255) aGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAg < 2:164583/150‑1 (MQ=255) gCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCCACGCACCGCTTCGCCCCACTGCTTTTAGTCGTCGTCACGCTGCGGCGAGt < 1:385357/150‑1 (MQ=255) cgacgaTAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCCCCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAgg > 1:136174/1‑150 (MQ=255) ggCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGcagcc < 1:347858/150‑1 (MQ=255) cagccaCCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGCCACGCTGCGGCGAGTTCCAGGt < 2:161085/138‑1 (MQ=255) cagccaCCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGCCACGCTGCGGCGAGTTCCAGGt > 1:161085/1‑138 (MQ=255) cTCGGGTTCAACCACGCCACCAGTGCGGCAACGCCACTGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCaag < 2:452759/150‑3 (MQ=255) aaCCACGCCACCAGTGCGCCCCAGGCAATGCCCAGCAGCGTCTGCGGCCCATGCCGGCGCACCGCTTCGCCAGCCGCCGTGTAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCgg < 1:139364/150‑1 (MQ=255) ccAGGCAATGCCCAGCAGCGTCTGCGGGCCAtgcctgggccgcactggtggcgtggttgaacccgagcttcctgtggtggctggcgcctatcgtcggttcgctggtgctgtcgatcccggtatcggt > 1:549131‑M2/1‑31 (MQ=255) ccAGGCAATGCCCAGCAGCGTCTGCGGGCCAtgcctgggccgcactggtggcgtggttgaacccgagcttcctgtggtggctggcgcctatcgtcggttcgctggtgctgtcgatcccggtatcggt < 2:549131‑M2/127‑97 (MQ=255) aaTGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGc > 2:123194/1‑150 (MQ=255) tGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACTCTGCGGCGAGTTCCAGGTCGCAGCCCAACCCAGGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCa < 1:600988/150‑1 (MQ=255) tGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAAGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCa < 2:530143/150‑1 (MQ=255) tGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGCCGCAGCCCAGCCGAGAAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCa < 2:33826/150‑1 (MQ=255) ccAGCAGCGTCTGCGGGCCAtgcctgggccgcactggtggcgtggttgaacccgagcttcctgtggtggctggcgcctatcgtcg > 1:65676‑M2/1‑20 (MQ=255) ccAGCAGCGTCTGCGGGCCAtgcctgggccgcactggtggcgtggttgaacccgagcttcctgtggtggctggcgcctatcgtcg < 2:65676‑M2/85‑66 (MQ=255) ccAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGgt < 1:519025/121‑1 (MQ=255) ccAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGgt > 2:519025/1‑121 (MQ=255) cGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCCCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCAGCAACATGga < 2:27073/150‑1 (MQ=255) | GCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGGTGTGGAAGATCATGCGTACCGGTGCCAGCAACATGGA > NC_002947/5724907‑5725176 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |