New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 195644	33 (1.430)	9 (0.390)	6/248	NT	21.5%	coding (1150/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 196261	33 (1.440)					coding (1767/26049 nt)	PP_0168	putative surface adhesion protein

TACAACAACGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGC  >  NC_002947/196115‑196404                                                                                                                                                   |                                                                                                                                                tACAACAACGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTc                                                                                                                                              >  1:187334/1‑150 (MQ=255) tACAACAACGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTc                                                                                                                                              >  1:22685/1‑150 (MQ=255)      caacGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGa                                                                                                                                         >  1:367003/1‑150 (MQ=255)       aacGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGaa                                                                                                                                        >  2:584870/1‑150 (MQ=255)       aacGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGCTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGaa                                                                                                                                        >  2:447114/1‑150 (MQ=255)          ggTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggc                                                                                                                                     <  1:491838/150‑1 (MQ=255)             tCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcggc                                                                                                                                  <  2:22685/150‑1 (MQ=255)                       gCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACtt                                                                                                                        >  1:149559/1‑150 (MQ=255)                            aCCATCGAGAACGCCACGGGCGGTAATTTCGAGCACCTGACCCCGAACCCGACGGCGGCAGAGACGACGATCGACGACTCGTTCGACACCACTACCGCGACACTGACGGAAAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTAACAcc                                                                                                                   >  2:40475/1‑150 (MQ=14)                               aTCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACCCGGTCGACACCACTACCGCAACCCGGCAGGCGAGCCCGTCGGGCACCGAAGACGGCGCGAGCACTTACGCCGta                                                                                                                >  2:272647/1‑149 (MQ=14)                                     aaCGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCAAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTCACACCGTGACCCTg                                                                                                          >  2:32173/1‑150 (MQ=255)                                               gCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTg                                                                                                <  1:77184/150‑1 (MQ=255)                                                                cTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACa                                                                               <  2:546112/150‑1 (MQ=39)                                                                cTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACa                                                                               >  1:546112/1‑150 (MQ=39)                                                                 tGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAACCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAg                                                                              >  2:85458/1‑150 (MQ=255)                                                                  gACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGt                                                                             >  1:345136/1‑150 (MQ=40)                                                                     cccGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGAc                                                                          >  2:510674/1‑150 (MQ=255)                                                                                cGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCCCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCGGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACg                                                               <  1:272647/150‑1 (MQ=255)                                                                                    ggCTCAGACCACGATTAAAGAATCGGAAGACAACACTACCGCGACCCTGACGTCGAGCCCGTCGGACACCGAAGGCGGCATGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCCACGGCCa                                                           >  2:256377/1‑150 (MQ=14)                                                                                        aaGACCACTATCAACGACTCTGTCGACACCGCTACCGCGACCCTGACAGCTAGCCCGACAGTTACCGAAGGCGGCGTGATCACTTACACCCTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTTTCCAACGGCCAAAcc                                                       <  2:116329/149‑1 (MQ=14)                                                                                              aCGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTAcc                                                 <  1:510674/150‑1 (MQ=40)                                                                                                      cGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGc                                         >  2:210406/1‑150 (MQ=255)                                                                                                             gTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGACGCGTGCaaa                                  >  2:44544/1‑150 (MQ=255)                                                                                                              tCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCaaga                                 <  1:584870/150‑3 (MQ=38)                                                                                                                gACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAAcc                               >  2:29551/1‑150 (MQ=255)                                                                                                                 acacCACTACCGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccggg                                                                                               >  1:421734‑M2/1‑35 (MQ=255)                                                                                                                 acacCACTACCGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccggg                                                                                               <  2:421734‑M2/85‑51 (MQ=255)                                                                                                                 acacCACTACCGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccg                                                                                                 >  2:535274‑M2/1‑35 (MQ=255)                                                                                                                 acacCACTACCGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccg                                                                                                 <  1:535274‑M2/83‑49 (MQ=255)                                                                                                                   accacTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAg                            >  2:461637/1‑150 (MQ=21)                                                                                                                      accaccGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtggtggcatcgaccgagtcgttgatcgtggtctgagccggggtcggattcggggtcagttgctcgaaattaccgcctgtggcgttctcgat                                             <  2:92029‑M2/130‑101 (MQ=255)                                                                                                                      accaccGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtggtggcatcgaccgagtcgttgatcgtggtctgagccggggtcggattcggggtcagttgctcgaaattaccgcctgtggcgttctcgat                                             >  1:92029‑M2/1‑30 (MQ=255)                                                                                                                       cTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGACAAAACCCAGGGCa                        >  2:170517/1‑150 (MQ=38)                                                                                                                        tACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGcc                                                                                              <  2:429909/79‑1 (MQ=35)                                                                                                                        tACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGcc                                                                                              >  1:429909/1‑79 (MQ=38)                                                                                                                           cgcgACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGt                    <  2:367003/150‑1 (MQ=35)                                                                                                                            gcgACCCTGACGGCGAGCACGTCGATCACCGGAGGCGGCGTCATCACTTACACCGTGACCTTGAGCTACCCTGCCCAGACGCCCGTGACGGTGACCGTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTc                   <  2:77690/150‑1 (MQ=11)                                                                                                                                cccTGACGGCGAGCCCGTCAgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccggggtcggattcggggtcagttgctcgaaattaccgcctgtggcgttctcgatggtgacgctga                                  >  1:611262‑M2/1‑20 (MQ=255)                                                                                                                                cccTGACGGCGAGCCCGTCAgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccggggtcggattcggggtcagttgctcgaaattaccgcctgtggcgttctcgatggtgacgctga                                  <  2:611262‑M2/131‑112 (MQ=255)                                                                                                                                 ccTGACGGCGAGCCCGTCAgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccggggtcggattcggggtcagttgctcgaaattaccgcctgtggcgttctcgatggtgacgctgacggtcgaaccgttgttgtag              <  2:360543‑M2/150‑132 (MQ=255)                                                                                                                                  cTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAATGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTc             <  1:44544/150‑1 (MQ=25)                                                                                                                                   tGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTcc            >  2:44349/1‑150 (MQ=35)                                                                                                                                          gAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGAcccc     >  1:462057/1‑150 (MQ=35)                                                                                                                                             cccGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGACAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGc  <  1:170517/150‑1 (MQ=25)                                                                                                                                                   |                                                                                                                                                TACAACAACGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGC  >  NC_002947/196115‑196404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.