New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1394321 = | 21 (0.910) | 3 (0.140) | 3/236 | NT | 15.5% | coding (52/1047 nt) | ruvB | Holliday junction ATP‑dependent DNA helicase RuvB |
? | NC_002947 | 1394357 = | 13 (0.600) | coding (88/1047 nt) | ruvB | Holliday junction ATP‑dependent DNA helicase RuvB |
ACAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCGGCCTGGGCAAGACCACCCTGGCCAACATCATCGCCCATGAAA > NC_002947/1394209‑1394504 | ccaggccgggcgggccgaagatcagcgtgtggtcaagcgactcgccgcggccgcgggcggcctggatgaacagcgccatctgctcgcgcaccaccggctggccgatgtactcGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGa > 2:15203‑M1/113‑150 (MQ=255) aCAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGa > 1:124432/1‑150 (MQ=255) aGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTa > 2:47087/1‑150 (MQ=255) gccTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCgg > 1:7346/1‑150 (MQ=255) gagCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTgc < 2:74336/150‑1 (MQ=255) aTCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGc > 2:408672/1‑150 (MQ=255) gCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCt < 1:408672/150‑1 (MQ=255) ggatTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGgc > 2:105255/2‑150 (MQ=255) tCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGccgccc < 1:42416/150‑1 (MQ=255) cGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCtt < 2:19713/150‑1 (MQ=255) gCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGa < 2:176839/142‑1 (MQ=255) gCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGa > 1:176839/1‑142 (MQ=255) cTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGAc < 2:124432/150‑1 (MQ=255) gccAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTg > 1:242506/1‑150 (MQ=255) gcgaAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGcccgcccg > 1:583698/1‑150 (MQ=255) tcgtccaggctcagcgggcgaatcgcacggtcctggacGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCGGCCTgg > 2:15203‑M2/39‑150 (MQ=255) tccaggctcagcgggcgaatcgcacggtcctggacGAGTACATCGGCCAGCCGGTGGTGCGCGa > 1:569683‑M2/36‑64 (MQ=255) tccaggctcagcgggcgaatcgcacggtcctggacGAGTACATCGGCCAGCCGGTGGTGCGCGa < 2:569683‑M2/29‑1 (MQ=255) tcaaGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCGGCCTGGGCa > 1:614970/4‑150 (MQ=255) CCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCGGCCTGGGCaa < 2:480975‑M1/150‑1 (MQ=255) acGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCGGCCTGGGCAAGACCACCCTGGCCAACATCATCGCCCATGaaa < 1:47087‑M2/148‑1 (MQ=255) | ACAAGGCCGGCCTGAGCAGTGAAGAGCTGATCCGCCGCAGCCTGAAAGGGATGATTTCCAAGTGATCGAAGCCGACCGCCTGATCGCCGCCAGTGGCCGCGACCGCGAAGAAGTCCAGGACCGTGCGATTCGCCCGCTGAGCCTGGACGAGTACATCGGCCAGCCGGTGGTGCGCGAGCAGATGGCGCTGTTCATCCAGGCCGCCCGCGGCCGCGGCGAGTCGCTTGACCACACGCTGATCTTCGGCCCGCCCGGCCTGGGCAAGACCACCCTGGCCAACATCATCGCCCATGAAA > NC_002947/1394209‑1394504 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |