New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1473864	31 (1.340)	3 (0.140)	3/234	NT	10.2%	coding (364/1317 nt)	algD	GDP‑mannose 6‑dehydrogenase
	?	NC_002947	= 1473895	24 (1.110)					coding (333/1317 nt)	algD	GDP‑mannose 6‑dehydrogenase

TTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGACACATCGCTGGCACGGATGGCTTCGGCGAAGTCGGTAGTGCCGCGCAGGCGG  >  NC_002947/1473757‑1474042                                                                                                                                           |                                                                                                                                                    ttCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTa                                                                                                                                          >  2:19882/1‑150 (MQ=255)   ccGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGc                                                                                                                                        <  2:125125/150‑1 (MQ=255)                  cGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGcaca                                                                                                                         <  1:19882/150‑1 (MQ=255)                     cGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACgg                                                                                                                      >  1:27075/1‑150 (MQ=255)                            gACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGAt                                                                                                               <  1:594725/150‑1 (MQ=255)                                          tGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCa                                                                                                 >  1:302191/1‑150 (MQ=255)                                             ccGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGt                                                                                              >  2:432793/1‑150 (MQ=255)                                                   aGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGt                                                                                        >  1:193208/1‑150 (MQ=255)                                                                 gggATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTgggg                                                                          <  1:120491/150‑1 (MQ=255)                                                                   gATGACCACGTTCTTGACGGTGCCAGGGGATACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGt                                                                        >  1:420295/1‑150 (MQ=255)                                                                   gATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGt                                                                        >  1:485509/1‑150 (MQ=255)                                                                     tGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGc                                                                      <  2:420295/150‑1 (MQ=255)                                                                                ttGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGatc                                                           >  1:137455/1‑150 (MQ=255)                                                                                   aCGGTGCCAGGCAGTACGTTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGatcatc                                                        <  1:195754/150‑1 (MQ=255)                                                                                   aCGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGatcatc                                                        <  1:129227/150‑1 (MQ=255)                                                                                     ggTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGa                                                      >  1:593052/1‑150 (MQ=255)                                                                                       tGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGaca                                                    <  2:60778/150‑1 (MQ=255)                                                                                          cAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCAcgcagcac                                                                                                                                             >  2:194826‑M2/1‑50 (MQ=255)                                                                                          cAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCAcgcagcac                                                                                                                                             <  1:194826‑M2/58‑9 (MQ=255)                                                                                          cAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTc                                                                                                         >  1:314308/1‑94 (MQ=255)                                                                                          cAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTc                                                                                                         <  2:314308/94‑1 (MQ=255)                                                                                           aGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGACACATc                                                >  2:75245/1‑150 (MQ=255)                                                                                                    ggTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGACACATCGCTGGCACg                                       >  1:280419/1‑150 (MQ=255)                                                                                                     gTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCAcgcagcaccgtactgcctggcaccgtcaagaacgtggtcatcccgatcctcgaagactgctcgggcaagaaggccggcgtcgacttcggcgtggcggtcaacccggaattc                                      <  1:54731‑M2/150‑112 (MQ=255)                                                                                                      tgctgcGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGACACATCGCTGGCACGGa                                     <  2:193208/150‑1 (MQ=255)                                                                                                      tgctgcGCACCACGATGGTGTGACGGCGGGTGATGTCAcgcagcaccgtactgcctggcaccgtcaagaacgtggtcatcccgatcctcgaagactcctcgagcaagcaggacggcgtcgacttcggcgtggcggtcaacccggaattcc                                     <  2:224145‑M2/150‑113 (MQ=255)                                                                                                       gctgcGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGGCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGACACATCGCTGGCACGGAt                                    <  1:491854/150‑1 (MQ=255)                                                                                                           cgcACCACGATGGTGTGACGGCGGGTGGTGTCAcgcagcaccgtactgcctggcaccgtcaagaacgtggtcatcccgatcctcgaagactgctcgggcaagaaggccggcgtcgacttcggcgtggcggtcaacccggaattcctgcgt                                >  2:54731‑M2/1‑33 (MQ=255)                                                                                                                cacGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGACACATCGCTGGCACGGATGGCTTCGGc                           >  2:615206/1‑150 (MQ=255)                                                                                                                   gagcgtgtGACGGCGGGTCGTGTCATGCGGTGCGTGGTCTATTTCCCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGACACATCGCTGGCACGGATGGCTTCGGCGaa                        <  1:107443/146‑1 (MQ=255)                                                                                                                                 gggTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGACACATCGCTGGCACGGATGGCTTCGGCGAAGTCGGTAGTGCcgc          <  2:27075/150‑1 (MQ=255)                                                                                                                                       tgtCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGACACATCGCTGGCACGGATGGCTTCGGCGAAGTCGGTAGTGCcgcctgcgc    >  1:559204/1‑144 (MQ=255)                                                                                                                                         tCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGACACATCGCTGGCACGGATGGCTTCGGCGAAGTCGGTAGTGCCGCGCAggcgg  >  2:3622/1‑150 (MQ=255)                                                                                                                                         tCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTCTTGGGGGTGCCCACGCATATCATCGACACATCGCTGGCACGGATGGCTTCGGCGAAGTCGGTAGTGCCGCGCAggcgg  <  1:75245/150‑1 (MQ=255)                                                                                                                                           |                                                                                                                                                    TTCCGGGTTGACCGCCACGCCGAAGTCGACGCCGGCCTTCTTGCCCGAGCAGTCTTCGAGGATCGGGATGACCACGTTCTTGACGGTGCCAGGCAGTACGGTGCTGCGCACCACGATGGTGTGACGGCGGGTGGTGTCACGCAGCACGTAGCCGATTTCGCGGCACACGGACTCGATGTACTCCAGGCCCAGGTCGCCGTTTTTCTTGCTGGGGGTGCCCACGCAGATCATCGACACATCGCTGGCACGGATGGCTTCGGCGAAGTCGGTAGTGCCGCGCAGGCGG  >  NC_002947/1473757‑1474042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.