New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1896811 | 20 (0.870) | 4 (0.190) | 4/232 | NT | 17.2% | coding (305/318 nt) | sugE | transporter |
? | NC_002947 | = 1896838 | 20 (0.930) | coding (278/318 nt) | sugE | transporter |
CGCGGGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGCCGGTCCAGATGGCATAGGCGGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAG > NC_002947/1896694‑1896983 | cgcgGGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGAtcagc > 1:151719‑M2/1‑145 (MQ=255) ggTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGAtcagcgcca > 2:41730‑M2/1‑141 (MQ=255) cATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGTCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGa < 1:419333/150‑1 (MQ=255) cATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGa > 1:30794/1‑150 (MQ=255) cATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGa > 1:560070/1‑150 (MQ=255) cAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGc > 2:48091/1‑150 (MQ=255) ggCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCAc > 1:530895/1‑150 (MQ=255) aTCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCAt < 1:343806/150‑1 (MQ=255) ccGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGa > 2:542479/1‑150 (MQ=255) gcAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCgggatcat > 2:304105/1‑143 (MQ=255) aaGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCg > 1:364807/1‑150 (MQ=255) aaCAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCGGCGATGACCGTa < 2:364807/150‑1 (MQ=255) cgcgGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATAGGCAATCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGcc > 2:173594/1‑150 (MQ=255) gcgGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGCCg < 1:48091/150‑1 (MQ=255) ggcgcactGCGAAAGGTGTTAGCTGGGGCTGACTTTCATGGCGACAGGACCGCAGGCGAATAGCGCCACACTCACCAGCCGCACCAGGGCCATGTACTCGCCGAACAGCATTATCTCGGCGATGACCGTACCAACTGCGCCTACGCCgga > 2:51585/7‑149 (MQ=255) gATAGGTGTTAGCTGGCGCTTACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGAATCGCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGCCGGTCCAGATGGCa < 1:282478/150‑1 (MQ=255) gggTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGCCGGTCCAGATGGCATAGGc > 1:577561/1‑150 (MQ=255) ggTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGCCGGTCCAGATGGCATAGGCg > 1:465815/1‑150 (MQ=255) tAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGCCGGTCCAGATGGCATAGGCGGTg < 2:560070/150‑1 (MQ=255) cTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGAtcagcgccagctaacccctatcgcagagggccgcgcaggcggctgacctgttcgcgcaacacttcaggctgcgccgcctccaccgggatggcggcgcctgccacgatggtcac < 1:494416‑M2/150‑114 (MQ=255) cTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGAtcagcgccagctaacccctatcgcagagggccgcgcaggcggctgacctgttcgcgcaacacttcaggctgcgccgcctccaccgggatggcggcgcctgccacgatggtcac > 2:494416‑M2/1‑37 (MQ=255) tGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGAtcagcgccagctaacccctatcgcagagggccgcgcaggcggctgacctgttcgcgcaacacttcaggctgcgccgcctccaccgggatggcggcgcctgc < 2:399923‑M2/137‑102 (MQ=255) tGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGAtcagcgccagctaacccctatcgcagagggccgcgcaggcggctgacctgttcgcgcaacacttcaggctgcgccgcctccaccgggatggcggcgcctgc > 1:399923‑M2/1‑36 (MQ=255) aCTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGCCGGTCCAGATGGCATAGGCGGTGCCCAGCGGCAGt > 1:582843/1‑150 (MQ=255) tttCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGCCGGTCCAGATGGCATAGGCGGTGCCCAGCGGCAGTTc > 2:496098/1‑150 (MQ=255) aGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGCCGGTCCAGATGGCATAGGCGGTGCCCAGCGGCAGTTCCTTc < 1:567188/150‑1 (MQ=255) gACGATCAGCGCCACACTGCCCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGCCGGTCCAGATGGCATAGGCGGTGCAAAGTGGCAGTTCCTTCATGGCcaggcccagcag < 1:173594/150‑1 (MQ=255) | CGCGGGTGACCATCGTGGCAGGCGCCGCCATCCCGGTGGAGGCGGCGCAGCCTGAAGTGTTGCGCGAACAGGTCAGCCGCCTGCGCGGCCCTCTGCGATAGGGGTTAGCTGGCGCTGACTTTCAGGCCGACAAGGCCGCAGACGATCAGCGCCACACTGACCAGCCGCACCAGGGCCATGGACTCGCCGAACAGAATGATCCCGGCGATGACCGTACCGACTGCGCCTACGCCGGTCCAGATGGCATAGGCGGTGCCCAGCGGCAGTTCCTTCATGGCCAGGCCCAGCAG > NC_002947/1896694‑1896983 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |