New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2049163	24 (1.040)	6 (0.270)	6/242	NT	21.7%	coding (152/372 nt)	PP_1822	hypothetical protein
	?	NC_002947	= 2049187	20 (0.890)					coding (128/372 nt)	PP_1822	hypothetical protein

ACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAAT  >  NC_002947/2049046‑2049330                                                                                                                                              |                                                                                                                                                aCCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTg                                                                                                                                         <  1:155564/150‑1 (MQ=255)   ccGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGc                                                                                                                                       >  1:26516/1‑150 (MQ=255)         gccACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAg                                                                                                                                                >  2:379516‑M2/1‑134 (MQ=255)         gccACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAg                                                                                                                                                <  1:379516‑M2/135‑2 (MQ=255)           cACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCt                                                                                                                               >  2:121683/1‑150 (MQ=255)                            tGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTAAGTTCACAGAACGGGCAGGCGTGGCACTGGTCCGGCGCCTGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGggcg                                                                                                              >  1:292217/1‑150 (MQ=255)                                   gCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGt                                                                                                       <  2:190812/150‑1 (MQ=255)                                                cTTGGCGTCGCGCAGCGCACCCGGAACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCtt                                                                                          <  2:440232/150‑1 (MQ=255)                                                  tGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTgg                                                                                        <  2:26516/150‑1 (MQ=255)                                                        cgcgCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGggc                                                                                  <  1:269954/150‑1 (MQ=255)                                                                gcCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATc                                                                          <  1:121683/150‑1 (MQ=255)                                                                         aCGTTCAAGCGGTGCAGTGTGCGGCCGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCg                                                                 >  1:78149/1‑150 (MQ=255)                                                                                 gCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGAt                                                         >  2:550841/1‑150 (MQ=255)                                                                                         gtgtGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATg                                                                                                                          >  2:200029/1‑77 (MQ=255)                                                                                         gtgtGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATg                                                                                                                          <  1:200029/77‑1 (MQ=255)                                                                                            tgCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGa                                              <  1:178147/150‑1 (MQ=255)                                                                                              cggcggGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAgg                                            <  1:370901/150‑1 (MQ=255)                                                                                                   ggTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGcc                                                                                      <  1:307906/103‑1 (MQ=255)                                                                                                   ggTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGcc                                                                                      >  2:307906/1‑103 (MQ=255)                                                                                                            acaGAACGGGCAGGCGTGGAACTGGTACAGCGCCAgcccgttctgtgtcaaaacccgccgaacacagcaacgcttgaacgtggcggtgacgctgcgcgacgccaagaacgactcaatgcaccgccaggccctgcacgaaggcggcggccg                              <  2:590470‑M2/150‑116 (MQ=255)                                                                                                            acaGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGc                              >  2:19411/1‑150 (MQ=255)                                                                                                              aGAACGGGCAGGCGTGGAACTGGTACAGCGCCAgcccgttctgtgtcaaaacccgccgcacactgcaccgcttgaacgtgccggtggcgctgcgcgacgccaagaacgacccggtgcaccgccaggccctgcaggaaggtggcggccggg                            <  1:582026‑M2/150‑118 (MQ=255)                                                                                                                aaCGGGCAGGCGTGGAACTGGTACAGCGCCAgcccgttctgtgtcaaaacccgccgcacactgcaccgcttgaacgtgccggtggcgctgcgcgacgccaagaacgacccggtgcac                                                           >  2:562865‑M2/1‑31 (MQ=255)                                                                                                                aaCGGGCAGGCGTGGAACTGGTACAGCGCCAgcccgttctgtgtcaaaacccgccgcacactgcaccgcttgaacgtgccggtggcgctgcgcgacgccaagaacgacccggtgcac                                                           <  1:562865‑M2/117‑87 (MQ=255)                                                                                                                     gCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGAt                     <  2:292217/150‑1 (MQ=255)                                                                                                                      cAGGCGTGGAACTGGTACAGCGCCAgcccgttctgtgtcaaaacccgccgcacactgcaccgcttgaacgtgccggtggcgctgcgcgacgccaagaacgacccggtgcacggccaggccctgcaggaaggtggcggccgggtgaaagtg                    <  1:121363‑M2/150‑126 (MQ=255)                                                                                                                                       cAGCGCCAgcccgttctgtgtcaaaacccgccgcacactgcaccgcttgaacgtgccggtggcgctgcgcgacgccaagaacgacccggtgcaccgccaggccctgcaggaaggtggcggccgggtgaaagtgccatgcctgcgcattga   >  2:582026‑M2/1‑8 (MQ=255)                                                                                                                                        aGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAAt  >  1:442916/1‑150 (MQ=255)                                                                                                                                        aGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAAt  <  2:78149/150‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                ACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAAT  >  NC_002947/2049046‑2049330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.