New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	713464 =	19 (0.820)	3 (0.140)	3/238	NT	18.3%	coding (450/531 nt)	lspA	lipoprotein signal peptidase
	?	NC_002947	713501 =	9 (0.410)					coding (487/531 nt)	lspA	lipoprotein signal peptidase

TTCTTGCTCTTGAACATATCCAGCGCCAGCATCACCGCACCAACGGTGATGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/713520‑713464 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgctgGATATGTTCAAGAGCAAGAAGTCCGAGGATCCGGTCCATGACTGACACCCGTATCGGCCAGAACACCGAAGTCACCCTGCACTTCGCGCTGCACCTGGAAAACGGCGACACCGTCGACAGCACGTTCGATAAGGCCCCGGCTA  >  NC_002947/713501‑713643                                                                                                                                                                                                          TTCTTGCTCTTGAACATATCCAGCGCCAGCATCACCGCACCAACGGTGATGGCGCTGGATATGTTCAAGAGCAAGAAGTCCGAGGATCCGGTCCATGACTGACACCCGTATCGGCCAGAACACCGAAGTCACCCTGCACTTCGCGCTGCA                                                    >  1:383854/1‑150        TCTTGAACATATCCAGCGCCAGCATCACCGCACCAACGGTGATGGCGCTGGATATGTTCAAGAGCAAGAAGTCCGAGGATCCGGTCCATGACTGACACCCGTATCGGCCAGAACACCGAAGTCACCCTGCACTTCGCGCTGCACCTGGAA                                             >  2:302745/1‑150                    CCAGCGCCAGCATCACCGCACCAACGGTGATGGCGCTGGATATGTTCAAGAGCAAGAAGTCCGAGGATCCGGTCCATGACTGACACCCGTATCGGCCAGAACACCGAAGTCACCCTGCACTTCGCGCTGCACCTGGAAAACGGCGACACC                                 >  2:21063/1‑150                                                  TGGCGCTGGATATGTTCAAGAGCAAGAAGTCCGAGGATCCGGTCCATGACTGACACCCGTATCGGCCAGAACACCGAAGTCACCCTGCACTTCGCGCTGCACCTGGAAAACGGC                                       >  1:160173/1‑114                                                  TGGCGCTGGATATGTTCAAGAGCAAGAAGTCCGAGGATCCGGTCCATGACTGACACCCGTATCGGCCAGAACACCGAAGTCACCCTGCACTTCGCGCTGCACCTGGAAAACGGC                                       <  2:160173/114‑1                                                   GGCGCTGGATATGTTCAAGAGCAAGAAGTCCGAGGATCCGGTCCATGACTGACACCCGTATCGGCCAGAACACCGAAGTCACCCTGCACTTCGCGCTGCACCTGGAAAACGGCGACACCGTCGACAGCACGTTCGATAAGGCCCCGGCTA  >  2:424481/1‑150                                                                                                                                                                                                          TTCTTGCTCTTGAACATATCCAGCGCCAGCATCACCGCACCAACGGTGATGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/713520‑713464 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgctgGATATGTTCAAGAGCAAGAAGTCCGAGGATCCGGTCCATGACTGACACCCGTATCGGCCAGAACACCGAAGTCACCCTGCACTTCGCGCTGCACCTGGAAAACGGCGACACCGTCGACAGCACGTTCGATAAGGCCCCGGCTA  >  NC_002947/713501‑713643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.