New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 743469 | 34 (1.460) | 6 (0.300) +AGGCAGGTCTGATTTCGC |
8/218 | NT | 21.5% | intergenic (+145/+129) | PP_0635/PP_0636 | group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein |
? | NC_002947 | = 1431465 | 17 (0.730) | intergenic (+74/+78) | PP_1252/PP_1253 | group II intron‑encoding maturase/ArsR family transcriptional regulator |
CTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCCTTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/743321‑743469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCCGGTTAATCGTATCCAGTATCGAGACCAGCCCGAGCCGGTCCCACAGTTTCTTTGG < NC_002947/1431465‑1431317 |||||||||||||||||| CTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCCTTGTGTGCCCGCTATGTAACGCAACCGAAGGTTGCTTCACATAGCGGGCACACAA > 1:41676/1‑150 TGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCCTTGTGTGCCCGCTATGTAACGCAACCGAAGGTTGCTTCACATAGCGGGCACACAAGGCAGGTCTGA < 2:41676/150‑1 GCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAAGGCAGGTCTGATTTCGCGCAATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCC > 1:567913/1‑128 GCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACAAGGCAGGTCTGATTTCGCGCAATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCC < 2:567913/128‑1 CCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGGCACACAAGGCAGGTCTGATTTCGCGCAATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGC > 2:150190/1‑150 GAAGCAACCTTCGGTTGCGTTACATAGCGGGCACACAAGGCAGGTCTGATTTCGCGCAATCGAGTAGGAGGCGGATT < 1:316985/77‑1 GAAGCAACCTTCGGTTGCGTTACATAGCGGGCACACAAGGCAGGTCTGATTTCGCGCAATCGAGTAGGAGGCGGATT > 2:316985/1‑77 CTTCGGTTGCGTTACATAGCGGACACACAAGGCAGGTCTGATTTCGCGCAATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCCGGTTAATCG > 2:517827/1‑150 ACACAAGGCAGGTCTGATTTCGCGCAATCGAGTAGGAGGCGGATTCACACCCGCCGTAATCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCGGGTTAATCGTATCCAGTATCGAGACCAGCCCGA > 1:75339/1‑150 TCTGATTTCGCGCAATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCCGGTTAATCGTATCCAGTATCGAGACCAGCCCGAGCCGGTCCCACA < 1:517827/150‑1 CGCGCAATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCCGGTTAATCGTATCCAGTATCGAGACCAGCCCGAGCCGGTCCCACAGTTTCTTT < 1:150190/150‑1 CGCAATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCCGGTTAATCGTATCCAGTATCGAGACCAGCCCGAGCCGGTCCCACAGTTTCTTTGG > 2:339971/1‑150 |||||||||||||||||| CTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCGCGAAATCAGACCTGCCTTGTGTGCCCGCTATGTGAAGCAACCTTCGGTTGCGTTACATAGCGGACACACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/743321‑743469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAATCGAGTAGGAGGCGGATTCACACCCGCCGTCCTCTCACACCACCGTGCGTACGGTTCCGTACACGGCGGTTCAGGTTACGCGGCTAAGCCGGTTAATCGTATCCAGTATCGAGACCAGCCCGAGCCGGTCCCACAGTTTCTTTGG < NC_002947/1431465‑1431317 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |