| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1297145 | NA (NA) | 8 (0.360) | 6/242 | NT | NA | coding (327/1329 nt) | PP_1133 | transposase |
| ? | NC_002947 | = 1297150 | NA (NA) | coding (332/1329 nt) | PP_1133 | transposase | |||||
GCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1296991‑1297145‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccagATCCACTGGCAATCCAGCACATCTGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGAATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACCTT < NC_002947/1297150‑1297002 GCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATT < 1:54706/150‑1GCCTGGGGATCAAGGTCGTTGCAGTGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATACTCAGCGAGCGTGGTTTTGACCTGTATCTCGTCATTGCCATATCAACTCGGCAAATCACGGGCAGTACATCAGATGTGCTGGATT < 2:409345/150‑1GCCGGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATT > 2:258242/1‑150 CTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGC < 1:506049/150‑1 CTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGC > 2:568299/1‑150 TGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCC > 2:165546/1‑150 GGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCCA > 1:190617/1‑150 GGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCCAG > 2:307791/1‑150 GTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGTAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCCAGATCCACTGGCAA < 2:380844/150‑1 CCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCCAGATCCACTGGCAATCCA < 2:315445/150‑1 CATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCCAGATCCACTGGCAATCCAG > 1:430222/1‑150 AGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGC < 2:390659/92‑1 AGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGC > 1:390659/1‑92 CGCGGTTTTGACGTTTATCTCGTCAATGCCAGATCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCCAGATCCACTGGCAA > 2:292971/1‑93 CGCGGTTTTGACGTTTATCTCGTCAATGCCAGATCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCCAGATCCACTGGCAA < 1:292971/93‑1 GTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCC > 2:457355/1‑67 GTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCC < 1:457355/67‑1 AGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCCAGATCCACTGGCAATCCA < 1:233027/67‑1 AGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCCAGATCCACTGGCAATCCA > 2:233027/1‑67 GCCGTAAATCAGATGTGCTGGATTGCCAGTGGATCTGGCAATCCAGCACATCTGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGAATCTCGTAAATTGGAATCCAATAAA > 2:430222/1‑150 TGCCAGATCCACTGGCAATCCAGCACATCTGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGAATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCA > 1:86018/1‑142 TGCCAGATCCACTGGCAATCCAGCACATCTGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGAATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCA < 2:86018/142‑1 GCCAGATCCACTGGCAATCCAGCACATCTGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGAATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGA < 2:410391/150‑1 gcgGATCCACTGGCAATCCAGCACATCTGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGAATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGAC < 2:283460/147‑1 GATCCACTGGCAATCCAGCACATCTGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGAATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACCTT < 2:226843/150‑1 GATCCACTGGCAATCCAGCACATCTGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGAATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACCTT > 1:575565/1‑150 GATCCACTGGCAATCCAGCACATCTGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGAATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACCTT < 2:606884/150‑1 GCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGAGCAACTCGGCAAATCACGGGCCGTAAATCAGATGTGCTGGATTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1296991‑1297145‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccagATCCACTGGCAATCCAGCACATCTGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGAATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACCTT < NC_002947/1297150‑1297002 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |