New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2057866 | 23 (0.990) | 5 (0.260) | 4/206 | NT | 16.0% | intergenic (+39/+89) | PP_1832/PP_1833 | oxidase/hypothetical protein |
? | NC_002947 | = 2057906 | 34 (1.800) | intergenic (+79/+49) | PP_1832/PP_1833 | oxidase/hypothetical protein |
CTGGGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2057701‑2057866 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtgaacccgctcctacGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCCTGCAT < NC_002947/2057906‑2057765 CTGGGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGG < 2:110242/150‑1 GGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTG < 1:155853/150‑1 TTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAA > 1:397302/1‑150 TTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGC > 2:64428/1‑150 TGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTTCACCCGCgaagc < 2:112080/150‑6 CACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACGACC > 1:583422/1‑150 ACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGT > 2:609643/1‑131 ACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGCGT < 1:609643/131‑1 GGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAG < 1:371777/150‑1 GCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGG < 2:583422/150‑1 CAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGG < 2:397302/150‑1 TTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGG < 1:326692/141‑1 TTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGG > 2:326692/1‑141 ACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCT > 2:304720/1‑70 ACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCT < 1:304720/70‑1 AACCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCC > 2:186308/1‑150 CCCGCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAGGCGGCCGGCAATGCGATTACAGCTCATCGGAACCAAGAAATGCCCGCGCAGTCACATCGCCCGTCAACCGCGCCTG > 1:526232/1‑150 GCTCCTACGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCCTGCAT > 2:60173/1‑150 CTGGGTTGAGTTGGGTGATACACCGTTTTGCCTGGCGTTGCGCTTGTATGGCAGCGAGCAGGGCATGCAGGCGCGGTTTACGGGCGATGTGACTGCGCGGGCATTTCTTGGTATCGACGAGCTGTAATCGCATTGCCGGCCGCTTCGCGGGTGAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2057701‑2057866 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtgaacccgctcctacGACCGACGGTTGCGCCGCCCTTAGGCATCGCGCAGTCAATGTAGGAGCGGGTTCACCCGCGAAGCGGCCGGCAATGCGATTACAGCTCGTCGATACCAAGAAATGCCCGCGCAGTCACATCGCCCGTAAACCGCGCCTGCAT < NC_002947/2057906‑2057765 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |