| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3523928 = | NA (NA) | 4 (0.180) | 4/246 | NT | NA | coding (598/1533 nt) | PP_3114 | transposase |
| ? | NC_002947 | 3523974 = | NA (NA) | coding (644/1533 nt) | PP_3114 | transposase | |||||
ACCTGCACACGTGTTTCATCACAGTGGATGATCCGACTCTTCAACAGGCTTTCGCGCATCAGATTCAGCAGCGGCTGAAAGTGCTCGCTGCATTGAATCACCCAGCGTGCCAGGGTTTGGCGCGGGATATCGATACCGTGACGCCCCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3524079‑3523928‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacGCTGGGTGATTCAATGCAGCGAGCACTTTCAGCCGCTGCTGAATCTGATGCGCGAAAGCCTGTTGAAGAGTCGGATCATCCACTGTGATGAAACACGTGTGCAGGTGTTGAAAGAGCCGGG > NC_002947/3523974‑3524094 ACCTGCACACGTGTTTCATCACAGTGGATGATCCGACTCTTCAACAGGCTTTCGCGCATCAGATTCAGCAGCGGCTGAAAGTGCTCGCTGCATTGAATCACCCAGCGTGCCAGGGTTTGGCGCGGGATATCGATACCGTGACGCCCCAGC > 1:80601/1‑150ACCTGCACACGTGTTTCATCACAGTGGATGATCCGACTCTTCAACAGGCTTTCGCGCATCAGATTCAGCAGCGGCTGAAAGTGCTCGCTGCATTGAATCACCCAGCGTGACAAGGTTTGGAACGGGATATCGATACCGTGCCGCCCCAGC > 1:260222/1‑150 CCTGCACACGTGTTTCATCACAGTGGATGATCCGACTCTTCAACAGGCTTTCGCGCATCAGATTCAGCAGCGGCTGAAAGTGCTCGCTGCATTGAATCACCCAGCGTGCCAGGGTTTGGCGCGGGATATCGATACCGTGACGCCCCAGCA < 2:477881/150‑1 TGAAAGTGCTCGCTGCATTGAATCACCCAGCGTGCCAGGGTTTGGCGCGGGATATCGATACCGTGACGCCCCAGCACGCTGGGTGATTCAATGCAGCGAGCACTTTCAGCCGCTGCTGAATCTGATGCGCGAAAG < 1:33455/135‑1 TGAAAGTGCTCGCTGCATTGAATCACCCAGCGTGCCAGGGTTTGGCGCGGGATATCGATACCGTGACGCCCCAGCACGCTGGGTGATTCAATGCAGCGAGCACTTTCAGCCGCTGCTGAATCTGATGCGCGAAAG > 2:33455/1‑135 CCAGCGTGCCAGGGTTTGGCGCGGGATATCGATACCGTGACGCCCCAGCACGCTGGGTGATTCAATGCAGCGAGCACTTTCAGCCGCTGCTGAATCTGATGCGCGAAAGCCTGTTGAAGAGTCGGATCATCCACTGTGATGAAACACGTG > 2:382445/1‑150 GGGATATCGATACCGTGACGCCCCAGCACGCTGGGTGATTCAATGCAGCGAGCACTTTCAGCCGCTGCTGAATCTGATGCGCGAAAGCCTGTTGAAGAGTCGGATCATCCACTGTGATGAAACACGTGTGCAGGTGTTGAAAGAGCCGGG < 1:382445/150‑1 ACCTGCACACGTGTTTCATCACAGTGGATGATCCGACTCTTCAACAGGCTTTCGCGCATCAGATTCAGCAGCGGCTGAAAGTGCTCGCTGCATTGAATCACCCAGCGTGCCAGGGTTTGGCGCGGGATATCGATACCGTGACGCCCCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3524079‑3523928‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacGCTGGGTGATTCAATGCAGCGAGCACTTTCAGCCGCTGCTGAATCTGATGCGCGAAAGCCTGTTGAAGAGTCGGATCATCCACTGTGATGAAACACGTGTGCAGGTGTTGAAAGAGCCGGG > NC_002947/3523974‑3524094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |