New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1002378 =	38 (1.630)	3 (0.130)	3/244	NT	8.8%	coding (612/1164 nt)	speC	ornithine decarboxylase
	?	NC_002947	1002468 =	26 (1.160)					coding (522/1164 nt)	speC	ornithine decarboxylase

AAGTCTTCCTTGAGGAAGCGGATGATTTCTTCGGCGTAGGTTTCCAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCG  >  NC_002947/1002229‑1002521                                                                                                                                                      |                                                                                                                                                aaGTCTTCCTTGAGGAAGCGGATGATTTCTTCGGCGTAGGTTTCCAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTaccttg                                                                                                                                                 >  1:324024/1‑150 (MQ=255)        ccTTGAGGAAGCGGATGATTTCTTCGGCGTAGGTTTCCAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTgg                                                                                                                                          <  1:153697/150‑1 (MQ=255)            aaGGAAGCGGATGATTTCTTCGGCGTAGGTTTCCAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGCTCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGAt                                                                                                                                      <  1:51450/149‑1 (MQ=255)                aaGCGGATGAGTTCTTCGGCGTAGGTTTCCAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATggcg                                                                                                                                  <  2:232108/150‑1 (MQ=255)                    ggATGATTTCTTCGGCGTAGGTTTCGAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGt                                                                                                                              <  2:106055/150‑1 (MQ=255)                    caaggccgcaccgggctcgaaagtgtatgtgcgtattctgactgaaggctccaccactgccgactggccactgtcccgcaagttcggctgccagaccgacatggccatggacctgctgatcctcgcccgcGACCt                                                                                                                                             <  1:169591‑M1/5‑1 (MQ=255)                    caaggccgcaccgggctcgaaagtgtatgtgcgtattctgactgaaggctccaccactgccgactggccactgtcccgcaagttcggctgccagaccgacatggccatggacctgctgatcctcgcccgcGACCt                                                                                                                                             >  2:169591‑M1/131‑135 (MQ=255)                     gatgatTTCTTCGGCGTAGGTTTCCAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTc                                                                                                                             >  1:478104/1‑150 (MQ=255)                      atgatTTCTTCGGCGTAGGTTTCCAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTcc                                                                                                                            >  1:414434/1‑150 (MQ=255)                              ttcGGCGTAGGTTTCCAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCt                                                                                                                    >  2:555667/1‑150 (MQ=255)                              ttcGGCGTAGGTTTCCAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCt                                                                                                                    <  2:319497/150‑1 (MQ=255)                                     tAGGTTTCCGGTCGTTTGGTTGGTGTGATGTAGTTGGCCGGTAAGCCGCCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTTTTTCAGACGTTCGAAGGTTACCTTGATCTTGGCGGTTGCGTCGTCCCACACGCTGATTTcg                                                                                                             >  2:87271/1‑150 (MQ=255)                                      aGGTTTCCAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTcgc                                                                                                            <  2:478104/150‑1 (MQ=255)                                                 cTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAg                                                                                                 <  1:400801/150‑1 (MQ=255)                                                      ggTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCAc                                                                                            <  2:414434/150‑1 (MQ=255)                                                            ggTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCGGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGaa                                                                                      >  2:397107/1‑150 (MQ=255)                                                             gTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTAACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAg                                                                                     >  2:154381/1‑150 (MQ=255)                                                                  gTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGAt                                                                                <  1:555667/150‑1 (MQ=255)                                                                  gTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGAt                                                                                <  1:253652/150‑1 (MQ=255)                                                                      ttGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCg                                                                            >  1:566486/1‑150 (MQ=255)                                                                      ttGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGAGGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCg                                                                            >  1:465517/1‑150 (MQ=255)                                                                         gCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTAt                                                                         <  2:566486/150‑1 (MQ=255)                                                                         gCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTAt                                                                         <  1:154381/150‑1 (MQ=255)                                                                           cGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATgg                                                                       <  2:425849/150‑1 (MQ=255)                                                                            gggAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGc                                                                      <  2:324024/150‑1 (MQ=255)                                                                                    accaccCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGcc                                                              <  1:111852/150‑1 (MQ=255)                                                                                    accaccCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGcc                                                              >  2:111852/1‑150 (MQ=255)                                                                                      gccactgtcccgcaagttcggctgccagaccgacatggccatggacctgctgatcctcgcccgcGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCa                                                            <  1:452788‑M1/86‑1 (MQ=255)                                                                                       accCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCGCCAGGCCCAg                                                           >  1:555482/1‑150 (MQ=255)                                                                                          cATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGCGATGCCGTATGGCACCAGGCCCAGGTc                                                        >  1:159/1‑150 (MQ=255)                                                                                             gTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTcgcg                                                     <  2:555482/150‑1 (MQ=255)                                                                                              ttGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAg                                                                                                 <  1:174907/105‑1 (MQ=255)                                                                                              ttGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAg                                                                                                 >  2:174907/1‑105 (MQ=255)                                                                                              cccgcaagttcggctgccagaccgacatggccatggacctgctgatcctcgcccgcGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCgg                                                    >  2:452788‑M1/57‑150 (MQ=255)                                                                                                  tCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGa                                                <  1:397107/150‑1 (MQ=255)                                                                                                  tCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGa                                                >  1:490288/1‑150 (MQ=255)                                                                                                              cGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGt                                    >  2:348078/1‑150 (MQ=255)                                                                                                                   ccgacatggccatggacctgctgatcctcgcccgcGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATg                               >  1:97068‑M1/36‑150 (MQ=255)                                                                                                                   ccGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATg                               >  1:189534/1‑150 (MQ=255)                                                                                                                                        tCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCAt                          >  1:419898/1‑134 (MQ=255)                                                                                                                                        tCGAAGATTACCTTGACCTTGGCGACGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCag                          <  2:419898/134‑2 (MQ=255)                                                                                                                                               ttACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTca                  <  2:409172/135‑2 (MQ=255)                                                                                                                                               ttACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTca                  >  1:409172/1‑134 (MQ=255)                                                                                                                                                tACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCg  >  2:271906/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                AAGTCTTCCTTGAGGAAGCGGATGATTTCTTCGGCGTAGGTTTCCAGGCTGTTGGTACGGGTGATGTAGTTGGCCGGGAAGCCACCACCCATGTTGATCAGCTTCAGTTCGATGCCGTCTTCTTCTTTCAGACGTTCGAAGATTACCTTGACCTTGGCGATGGCGGCGTCCCACACGCTGATGTCGCGTTGCTGCGAGCCCACGTGGAAGGAGATGCCGTATGGCACCAGGCCCAGGTCGCGGGCGAGGATCAGCAGGTCCATGGCCATGTCGGTCTGGCAGCCGAACTTGCG  >  NC_002947/1002229‑1002521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.