| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4647641 | 6 (0.260) | 5 (0.310) | 4/176 | NT | 45.2% | intergenic (+48/+83) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947 | = 4647671 | 8 (0.500) | intergenic (+78/+53) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
GACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACG > NC_002947/4647494‑4647784 | gACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGAt < 2:459411/150‑1 (MQ=255) aTGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGTATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTgcgc < 2:178669/150‑1 (MQ=255) cccGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtag > 2:481055‑M2/1‑143 (MQ=255) tGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcggg < 2:44870‑M1/150‑45 (MQ=255) aGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttac > 1:334544‑M2/1‑131 (MQ=255) cccGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgc < 1:268567‑M2/150‑24 (MQ=255) cccGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggt > 2:362016‑M2/1‑127 (MQ=255) cccGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggt < 1:362016‑M2/142‑16 (MQ=255) cATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggcc > 2:268567‑M2/1‑118 (MQ=255) tCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgg < 1:108557‑M1/117‑44 (MQ=255) tCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgg > 2:108557‑M1/1‑74 (MQ=255) tCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgg > 1:524610‑M1/1‑71 (MQ=255) tCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgg < 2:524610‑M1/114‑44 (MQ=255) cgGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagc > 1:219936‑M2/1‑88 (MQ=255) cgGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagc < 2:219936‑M2/99‑12 (MQ=255) aGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACGGACCGCAACAGTTTTCAATGCTGCTcgcccgcc > 1:610846/1‑150 (MQ=255) ggCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatg > 2:268567‑M1/1‑32 (MQ=255) ggagcgggtTTACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcggg < 1:331160‑M1/67‑45 (MQ=255) gcgGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggg < 1:268567‑M1/150‑128 (MQ=255) gTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcct > 1:334544‑M1/1‑19 (MQ=255) aaCCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACaaa > 1:546426/1‑150 (MQ=255) aCCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggg < 1:362016‑M1/142‑128 (MQ=255) aCCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggg > 2:362016‑M1/1‑15 (MQ=255) cccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggca < 2:44870‑M2/150‑107 (MQ=255) cccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtaaacccgctcc < 1:331160‑M2/70‑27 (MQ=255) ccGCTCCTACAGGggggcgcacaatgtttgggcctgc < 1:75787‑M1/37‑25 (MQ=255) ccGCTCCTACAGGggggcgcacaatgtttgggcctgc > 2:75787‑M1/1‑13 (MQ=255) ccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacga > 2:108557‑M2/1‑43 (MQ=255) ccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacga < 1:108557‑M2/117‑75 (MQ=255) ccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttga > 1:524610‑M2/1‑43 (MQ=255) ccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttga < 2:524610‑M2/114‑72 (MQ=255) ccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGc > 2:420347/1‑150 (MQ=255) gCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccg < 2:219936‑M1/99‑89 (MQ=255) gCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccg > 1:219936‑M1/1‑11 (MQ=255) gCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGcac > 2:3005/1‑150 (MQ=255) cTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcggg > 2:481055‑M1/1‑7 (MQ=255) cTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCAcg > 2:386363/1‑150 (MQ=255) | GACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACG > NC_002947/4647494‑4647784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |