| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4889640 | 22 (0.940) | 4 (0.220) | 4/200 | NT | 16.6% | intergenic (+41/‑112) | hyi/glxR | hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase |
| ? | NC_002947 | = 4889677 | 23 (1.260) | intergenic (+78/‑75) | hyi/glxR | hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase | |||||
GGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCACCGGCATC > NC_002947/4889527‑4889784 | gggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTg < 1:30443/150‑1 (MQ=255) aGTACAAGCCGCTGACCACCACCGAAGCGGGCCGGGGCTGGCGGAAACCCCACAACGCAATCTGAGGAACAACGCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgg < 2:266727‑M1/150‑45 (MQ=255) tACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggc < 2:30220‑M1/150‑47 (MQ=255) aaGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGa > 2:392605/1‑129 (MQ=255) aaGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGa < 1:392605/129‑1 (MQ=255) ccaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacag < 2:309245‑M2/150‑26 (MQ=255) caccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcggg < 1:310599‑M1/132‑46 (MQ=255) caccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcggg > 2:310599‑M1/1‑87 (MQ=255) ccGAAGGGGGCCTGGGCTGGCTAAAAACCCTCAACGCAATCTGCAGAACAACTCGGGCCCCTGTGGGAGCGGGCTCGCCCGCCAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAgggg < 1:282010/150‑1 (MQ=25) cGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCaaa < 1:518779/150‑1 (MQ=255) ccTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgctt < 1:309245/150‑1 (MQ=255) aaaCCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATcac > 2:499342/1‑150 (MQ=255) cacaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATc > 1:276566/1‑143 (MQ=255) cacaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATc < 2:276566/143‑1 (MQ=255) acaACGCAATCTGAGGAACAACTCGGGCCACTTTGGGAGCGGGCACGCCCGCGAACACCGGCAAAGCCGGTGCCAGCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCACCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTAc > 1:81677/1‑150 (MQ=37) acaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTAc > 1:396812/1‑150 (MQ=255) gAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTtct > 2:405554/1‑150 (MQ=255) gAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCAAGCTCCCACAGGGGGCCAATGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTtct > 1:559716/1‑150 (MQ=255) acTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttgctt > 1:554837/1‑114 (MQ=255) acTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttgctt < 2:554837/114‑1 (MQ=255) cTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTga > 1:111664/1‑115 (MQ=255) cTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTga < 2:111664/115‑1 (MQ=255) cTGTGGGAGCGGGCTCGCCCGCGAAgcagacaactcggtggatggcaccggctttgccggtgttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtgg < 2:309245‑M1/150‑126 (MQ=255) tctgGGACCCGGCTCGCCCGCGAACACCGGCAAAGCCGATGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAAGCGGt < 2:81677/148‑1 (MQ=255) gCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTAGCGGGCGAGCCCGCTGAATAAAAGGGCGAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCg > 1:381028/1‑150 (MQ=38) gCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtggtggtcagcggcttgta < 2:30220‑M2/150‑105 (MQ=255) gCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATc > 2:230065/1‑141 (MQ=255) gCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATc < 1:230065/141‑1 (MQ=255) cccGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtg > 2:310599‑M2/1‑45 (MQ=255) cccGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagggtcccgagttgttcctcagattgcgttgtgggttttcagccagcccaggcccgcttcggtg < 1:310599‑M2/132‑88 (MQ=255) ccGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCttcgcgggcgagcccgctcccacagggtcccgcgttgttcctcagattgcgttgtggggtttccgccagccccggcccgcttcggtggtggtcagcggcttgtact < 2:266727‑M2/150‑107 (MQ=255) cgcgAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCACCGGcatc > 1:145390/1‑150 (MQ=255) | GGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCACCGGCATC > NC_002947/4889527‑4889784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |